Evidence map›Paper›PMID 30705324›Full record

ArticleScientific reports2019

Leukocyte expression profiles reveal gene sets with prognostic value for seizure-free outcome following stereotactic laser amygdalohippocampotomy.

Ryan Sprissler, Robert Bina, Willard Kasoff, Marlys H Witte, Michael Bernas, Christina Walter, David M Labiner, Branden Lau, Michael F Hammer, Martin E Weinand

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ryan SprisslerCenter for Applied Genetics and Genomic Medicine, University of Arizona, Tucson, AZ, 85721, USA.
Robert BinaDivision of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
Willard KasoffDivision of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
Marlys H WitteDepartment of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
Michael BernasDepartment of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
Christina WalterDivision of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
David M LabinerDepartment of Neurology, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
Branden LauArizona Research Labs Division of Biotechnology, University of Arizona, Tucson, AZ, 85721, USA.
Michael F HammerCenter for Applied Genetics and Genomic Medicine, University of Arizona, Tucson, AZ, 85721, USA. mfh@email.arizona.edu.
Martin E WeinandDivision of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.
University of Arizona · USUniversity of North Texas Health Science Center · US

Funding

BBB Tight Junctions During HIV-1 dementiaR01MH065151 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PERSIDSKY, YURI · 2002 to 2016
$5.9M
NIMH NIH HHS R01 MH065151
6 · The paper itself

Abstract

Among patients with intractable epilepsy, the most commonly performed surgical procedure is craniotomy for amygdalohippocampectomy (AH). Stereotactic laser amygdalohippocampotomy (SLAH) has also been recently employed as a minimally invasive treatment for intractable temporal lobe epilepsy (TLE). Among patients treated with AH and SLAH approximately 65% and 54% of patients become seizure-free, respectively. Therefore, selection criteria for surgical candidates with improved prognostic value for post-operative seizure-free outcome are greatly needed. In this study, we perform RNA sequencing (RNA-Seq) on whole blood leukocyte samples taken from 16 patients with intractable TLE prior to SLAH to test the hypothesis that pre-operative leukocyte RNA expression profiles are prognostic for post-operative seizure outcome. Multidimensional scaling analysis of the RNA expression data indicated separate clustering of patients with seizure free (SF) and non-seizure-free (NSF) outcomes. Differential expression (DE) analysis performed on SF versus NSF groups revealed 24 significantly differentially expressed genes (≥2.0-fold change, p-value < 0.05, FDR <0.05). Network and pathway analyses identified differential activation of pathways involved in lipid metabolism, morphology of oligodendrocytes, inflammatory response, and development of astrocytes. These results suggest that pre-operative leukocyte expression profiles have prognostic value for seizure outcome following SLAH.

Indexed as

AdolescentAdultEpilepsy, Temporal LobeFemaleHumansLeukocytesMaleMiddle AgedPrognosisSeizuresSequence Analysis, RNAStereotaxic TechniquesYoung Adult

Identifiers

PMID30705324
PMCPMC6355811
OpenAlexW2912616976

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.