Evidence map›Paper›PMID 30704496›Full record

ArticleMalaria journal2019

Genetic variability of Plasmodium falciparum histidine-rich proteins 2 and 3 in Central America.

Gustavo Fontecha, Alejandra Pinto, Denis Escobar, Gabriela Matamoros, Bryan Ortiz

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Genetic deletions and high diversity ofFrontiers in epidemiology · 2022
    Article
  9. Article
  10. Article
  11. Diseases (Basel, Switzerland) · 2020
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gustavo FontechaMicrobiology Research Institute, National Autonomous University of Honduras, Tegucigalpa, Honduras. gustavo.fontecha@unah.edu.hn.
Alejandra PintoMicrobiology Research Institute, National Autonomous University of Honduras, Tegucigalpa, Honduras.
Denis EscobarMicrobiology Research Institute, National Autonomous University of Honduras, Tegucigalpa, Honduras.
Gabriela MatamorosMicrobiology Research Institute, National Autonomous University of Honduras, Tegucigalpa, Honduras.
Bryan OrtizMicrobiology Research Institute, National Autonomous University of Honduras, Tegucigalpa, Honduras.
National Autonomous University of Honduras · HN

Funding

DICU-UNAH S/NPAHO-HONDURAS S/N
6 · The paper itself

Abstract

backgroundMalaria is an important disease in many tropical countries. Rapid diagnostic tests (RDTs) are valuable tools for diagnosing malaria in remote areas. The majority of RDTs used for the diagnosis of Plasmodium falciparum are based on the detection of the specific histidine-rich proteins (PfHRP2 and PfHRP3). During the last decade, the threat posed by the lack of expression of these antigens and the variability of the proteins on the diagnosis of malaria has been widely discussed. The aim of this study was to evaluate the genetic diversity of pfhrp2 and pfhrp3 of P. falciparum isolates collected in three Central American countries.

methodsDNA samples were amplified and sequenced to assess the diversity of nucleotides and amino acids. A search for known epitopes within the amino acid sequence was carried out, and the sensitivity of the sequences was evaluated according to a predictive model. A phylogenetic analysis was carried out including homologous sequences from different regions of the world. Protein structures were predicted in silico.

resultsFive different patterns for PfHRP2 and one pattern for PfHRP3 were identified. Isolates from Central America show a high level of genetic diversity in pfhrp2; however, the amino acid sequences seem to contain enough motifs to be detected by the RDTs currently available.

conclusionIt is unlikely that the variability of the pfhrp2 and pfhrp3 genes has a significant impact on the ability of the RDTs to detect the PfHRP antigens in Central America.

Indexed as

Genetic VariationAntigens, ProtozoanDiagnostic Tests, RoutineGuatemalaHondurasNicaraguaPhylogenyPlasmodium falciparumProtein Structure, TertiaryProtozoan ProteinsAntigens, ProtozoanHRP-2 antigen, Plasmodium falciparumHRP3 protein, Plasmodium falciparumProtozoan ProteinsGuatemalaHondurasMalariaNicaraguapfhrp2pfhrp3Plasmodium falciparumRapid diagnostic test

Identifiers

PMID30704496
PMCPMC6357481
OpenAlexW2925268735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.