Evidence map›Paper›PMID 30702368›Full record

ArticleJournal of insurance medicine (New York, N.Y.)2018

A Droplet Digital PCR Assay for Smoking Predicts All-Cause Mortality.

Allan M Andersen, Philip T Ryan, Fredrick X Gibbons, Ronald L Simons, Jeffrey D Long, Robert A Philibert

Abstract read
In one paragraph

Article in Journal of insurance medicine (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Methylation, smoking, and reduced lung function.The European respiratory journal · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Allan M Andersen1   Department of Psychiatry, University of Iowa, Iowa City, IA, USA 52242.
Philip T Ryan1   Department of Psychiatry, University of Iowa, Iowa City, IA, USA 52242.
Fredrick X Gibbons2   Department of Psychological Sciences, University of Connecticut, Storrs, CT 06269.
Ronald L Simons3   Department of Sociology, University of Georgia, Athens, GA 30602.
Jeffrey D Long1   Department of Psychiatry, University of Iowa, Iowa City, IA, USA 52242.
Robert A Philibert1   Department of Psychiatry, University of Iowa, Iowa City, IA, USA 52242.

Funding

AACAP Physician Scientist Program in Substance UseK12DA000357 · NIDA · AMERICAN ACADEMY-CHILD/ADOLESCENT PSYCH · PI Kevin M. Gray · 1998 to 2026
$29.1M
The Iowa Neuroscience Specialty Program in Research Education (INSPIRE)T32MH019113 · NIMH · UNIVERSITY OF IOWA · PI HANNA E STEVENS, John A Wemmie · 1991 to 2026
$5.6M
The Relationship of AHRR Methylation to Risky Adolescent BehaviorsR01DA037648 · NIDA · UNIVERSITY OF IOWA · PI GERRARD, MEG, PHILIBERT, ROBERT A · 2014 to 2017
$2.4M
A Quantitative Epigenetic Test for Guiding Smoking Cessation TherapyR44CA213507 · NCI · BD HOLDING, INC. · PI PHILIBERT, ROBERT A · 2016 to 2017
$1.3M
A Saliva DNA based Epigenetic Test for Adolescent SmokingR44DA041014 · NIDA · BD HOLDING, INC. · PI PHILIBERT, ROBERT A · 2016 to 2016
$147k
NCI NIH HHS R44 CA213507NIDA NIH HHS K12 DA000357NIDA NIH HHS R01 DA037648NIDA NIH HHS R44 DA041014NIMH NIH HHS T32 MH019113
6 · The paper itself

Abstract

objectives-Determine whether an epigenetic assay for smoking predicts all-cause mortality in adults participating in a longitudinal study of Iowa adoptees.

background-Improved biomarkers for smoking are needed given its large public health impact and significant limitations of both self-report and current biomarkers, such as cotinine in detecting smoking. In the past 5 years, multiple epigenome-wide association studies of smoking have identified loci suitable for translation as epigenetic biomarkers for smoking, in particular the CpG cg05575921. Digital polymerase chain reaction methods hold promise for the development of this and other epigenetic biomarkers.

methods-Participants in the Iowa Adoption Studies were interviewed regarding their smoking habits. DNA was prepared from whole blood and bisulfite-converted for methylation analysis and digital droplet polymerase chain reaction assay of methylation at cg05575921 was performed. National Death Index records were requested for 584 study participants, resulting in 24 complete matches, 210 partial matches and 350 non-matching records. Complete matches were coded as deceased while the remainder were coded as alive (ie, censored). In total, methylation data and vital status information were available for a total of N = 193 subjects, including 15 deceased and 178 non-deceased. Cox regression was used to examine the ability of cg05575921 methylation as a continuous value to predict the timing of mortality with and without the inclusion of age, sex, race, BMI, marital status, educational status, socioeconomic status, cardiovascular risk factors, and a history of cancer as covariates.

results-Methylation at cg05575921 predicted the hazard of mortality as the sole predictor and after accounting for major demographic and clinical risk factors. The fitted model showed the hazard ratio increased by 3.5% for every 1% decrease in methylation.

conclusions-Decreased methylation at cg05575921, an emerging epigenetic biomarker for smoking, was associated with early mortality in a longitudinal study of adults after accounting for the impact of major demographic and clinical risk factors for all-cause mortality. This approach may be useful in clinical research or actuarial assessments.

Indexed as

BiomarkersDNA MethylationEpigenomicsTobacco SmokingAdultAgedEpigenesis, GeneticFemaleHumansLongitudinal StudiesMaleMiddle AgedPolymerase Chain ReactionPredictive Value of TestsRisk FactorsBiomarkersaddictionBiomarkersepigeneticssubstance use disorderstobacco

Identifiers

PMID30702368
PMCPMC7518325

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.