Evidence map›Paper›PMID 30700571›Full record

ArticleBioscience reports2019

Zinc binding regulates amyloid-like aggregation of GAPR-1.

Jie Sheng, Nick K Olrichs, Willie J Geerts, Xueyi Li, Ashfaq Ur Rehman, Barend M Gadella, Dora V Kaloyanova, J Bernd Helms

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

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  8. Cofactor-mediated amyloidogenesis.Bioscience reports · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Jie ShengDepartment of Biochemistry and Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands.
Nick K OlrichsDepartment of Biochemistry and Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands.ORCID 0000-0001-7291-2605
Willie J GeertsBiomolecular Imaging, Bijvoet Center, Utrecht University, Utrecht, the Netherlands.
Xueyi LiSchool of Pharmacy, Shanghai Jiao Tong University, Shanghai, China.
Ashfaq Ur RehmanDepartment of Bioinformatics and Biostatistics, Shanghai Jiao Tong University, Shanghai, China.
Barend M GadellaDepartment of Biochemistry and Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands.
Dora V KaloyanovaDepartment of Biochemistry and Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands.
J Bernd HelmsDepartment of Biochemistry and Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands J.B.Helms@uu.nl.
Utrecht University · NLShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the CAP superfamily (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 proteins) are characterized by the presence of a CAP domain that is defined by four sequence motifs and a highly conserved tertiary structure. A common structure-function relationship for this domain is hitherto unknown. A characteristic of several CAP proteins is their formation of amyloid-like structures in the presence of lipids. Here we investigate the structural modulation of Golgi-Associated plant Pathogenesis Related protein 1 (GAPR-1) by known interactors of the CAP domain, preceding amyloid-like aggregation. Using isothermal titration calorimetry (ITC), we demonstrate that GAPR-1 binds zinc ions. Zn

Indexed as

AmyloidAnimalsBinding SitesCalorimetryCircular DichroismHeparinHumansMembrane ProteinsMiceMolecular Dynamics SimulationMutationProtein DomainsSalivary Proteins and PeptidesSeminal Plasma ProteinsTrypsinZincAmyloidCRISP3 protein, humancysteine-rich secretory protein 4, mouseGLIPR2 protein, humanHeparinMembrane ProteinsSalivary Proteins and PeptidesSeminal Plasma ProteinsTrypsinZincAmyloidCAP superfamilyCRISPGAPR-1HeparinZinc

Identifiers

PMID30700571
PMCPMC6900432
OpenAlexW2914928528

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.