Evidence map›Paper›PMID 30699208›Full record

ArticlePloS one2019

Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences.

Carolina Bruno de Sousa, Cymon J Cox, Luís Brito, Maria Madalena Pavão, Hugo Pereira, Ana Ferreira, Catarina Ginja, Lenea Campino, Ricardo Bermejo, Manuela Parente and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Marine algal flora of São Miguel Island, Azores.Biodiversity data journal · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Carolina Bruno de SousaCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.
Cymon J CoxCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.
Luís BritoCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.
Maria Madalena PavãoCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.
Hugo PereiraCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.
Ana FerreiraUniversidade dos Açores, Faculdade de Ciências e Tecnologia, Ponta Delgada, Açores, Portugal.
Catarina GinjaCIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, Vairão, Portugal.
Lenea CampinoGlobal Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisboa, Portugal.
Ricardo BermejoDepartamento de Biología- Área de Ecología, Facultad de Ciencias del Mar y Ambientales, Universidad de Cádiz, Puerto Real, Cádiz, Spain.
Manuela ParenteCIBIO-Açores, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores, Departamento de Biologia, Universidade dos Açores, Ponta Delgada, Portugal.
João VarelaCentro de Ciências do Mar, Universidade do Algarve, Faro, Portugal.ORCID 0000-0003-3101-693X
University of Algarve · PTUniversidade dos Açores · PTOllscoil na Gaillimhe – University of Galway · IEUniversidade do Porto · PTUniversidade Nova de Lisboa · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cystoseira is a common brown algal genus widely distributed throughout the Atlantic and Mediterranean regions whose taxonomical assignment of specimens is often hampered by intra- and interspecific morphological variability. In this study, three mitochondrial regions, namely cytochrome oxidase subunit 1 (COI), 23S rDNA (23S), and 23S-tRNAVal intergenic spacer (mt-spacer) were used to analyse the phylogenetic relationships of 22 Cystoseira taxa (n = 93 samples). A total of 135 sequences (48 from COI, 43 from 23S and 44 from mt-spacer) were newly generated and analysed together with Cystoseira sequences (9 COI, 31 23S and 35 mt-spacer) from other authors. Phylogenetic analysis of these three markers identified 3 well-resolved clades and also corroborated the polyphyletic nature of the genus. The resolution of Cystoseira taxa within the three clades improves significantly when the inclusion of specimens of related genera was minimized. COI and mt-spacer markers resolved the phylogeny of some of the Cystoseira taxa, such as the C. baccata, C. foeniculacea and C. usneoides. Furthermore, trends between phylogeny, embryonic development and available chemotaxonomic classifications were identified, showing that phylogenetic, chemical and morphological data should be taken into account to study the evolutionary relationships among the algae currently classified as Cystoseira. The resolution of Cystoseira macroalgae into three well supported clades achieved here is relevant for a more accurate isolation and identification of natural compounds and the implementation of conservation measures for target species.

Indexed as

PhylogenyAtlantic OceanDNA, MitochondrialDNA, RibosomalElectron Transport Complex IVMediterranean RegionPhaeophyceaeRNA, Transfer, ValSequence Analysis, DNADNA, MitochondrialDNA, RibosomalElectron Transport Complex IVRNA, Transfer, Val

Identifiers

PMID30699208
PMCPMC6364706
OpenAlexW2914436737

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.