Evidence map›Paper›PMID 30697115›Full record

ArticleBreeding science2018

Assessing hidden parentage and genetic integrity of the "United Fruit Clones" of cacao (

Allan Mata-Quirós, Adriana Arciniegas-Leal, Wilbert Phillips-Mora, Lyndel W Meinhardt, Lambert Motilal, Sue Mischke, Dapeng Zhang

Abstract read
In one paragraph

Article in Breeding science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Allan Mata-QuirósPrograma de Mejoramiento Genético de Cacao, CATIE 7170, Turrialba 30501, Costa Rica.
Adriana Arciniegas-LealPrograma de Mejoramiento Genético de Cacao, CATIE 7170, Turrialba 30501, Costa Rica.
Wilbert Phillips-MoraPrograma de Mejoramiento Genético de Cacao, CATIE 7170, Turrialba 30501, Costa Rica.
Lyndel W MeinhardtUSDA-ARS BARC, SPCL, Rm 223 Bldg 001 BARC-West, 10300 Baltimore Avenue, Beltsville, MD 20705, USA.
Lambert MotilalCocoa Research Center, University of the West Indies, Trinidad & Tobago.
Sue MischkeUSDA-ARS BARC, SPCL, Rm 223 Bldg 001 BARC-West, 10300 Baltimore Avenue, Beltsville, MD 20705, USA.
Dapeng ZhangUSDA-ARS BARC, SPCL, Rm 223 Bldg 001 BARC-West, 10300 Baltimore Avenue, Beltsville, MD 20705, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The international cacao collection in CATIE, Costa Rica contains nearly 1200 accessions of cacao, mainly from the center of genetic diversity of this species. Among these accessions, the United Fruit clones (UF clones) were developed by the United Fruit Company in Costa Rica, and they represent one of the earliest groups of improved cacao germplasm in the world. Some of these UF clones have been used as key progenitors for breeding resistance/tolerance to Frosty Pod and Black Pod diseases in the Americas. Accurate information on the identity and background of these clones is important for their effective use in breeding. Using Single Nucleotide Polymorphism (SNP) markers, we genotyped 273 cacao germplasm accessions including 44 UF clones and 229 reference accessions. We verified the true-to-type identity of UF clones in the CATIE cacao collection and analyzed their population memberships using maximum-likelihood-based approaches. Three duplicate groups, representing approximately 30% of the UF clones, were identified. Both distance- and model-based clustering methods showed that the UF clones were mainly composed of Trinitario, ancient Nacional and hybrids between ancient Nacional and Amelonado. This result filled the information gap about the UF clones thus will improve their utilization for cacao breeding.

Indexed as

AmelonadoCATIECentral Americagenebankgenetic diversityNacionaltropical tree

Identifiers

PMID30697115
PMCPMC6345235

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.