Evidence map›Paper›PMID 30696899›Full record

ArticleScientific reports2019

Genome-guided and mass spectrometry investigation of natural products produced by a potential new actinobacterial strain isolated from a mangrove ecosystem in Futian, Shenzhen, China.

Dini Hu, Cheng Gao, Chenghang Sun, Tao Jin, Guangyi Fan, Kai Meng Mok, Simon Ming-Yuen Lee

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Dini HuFaculty of Science and Technology, Department of Civil and Environmental Engineering, University of Macau, Macao, China.
Cheng GaoState Key Laboratory of Quality Research in Chinese Medicine and institute of Chinese Medical Sciences, University of Macau, Macao, China.
Chenghang SunInstitute of Medicinal Biotechnology, Chinese Academy of Medical Science & Peking Union Medical College, Tiantanxili No 1, Beijing, 100050, P. R. China.
Tao JinBeijing Genome Institute-Shenzhen, Shenzhen, 518083, China.
Guangyi FanBeijing Genome Institute-Shenzhen, Shenzhen, 518083, China.
Kai Meng MokFaculty of Science and Technology, Department of Civil and Environmental Engineering, University of Macau, Macao, China.
Simon Ming-Yuen LeeState Key Laboratory of Quality Research in Chinese Medicine and institute of Chinese Medical Sciences, University of Macau, Macao, China. simonlee@umac.mo.
University of Macau · MOChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Actinobacteria, a group of gram-positive bacteria, can produce plenty of valuable bioactive secondary metabolites, especially antibiotics. Hence, in order to search for new actinobacteria, actinobacterial isolates were obtained from rhizosphere soil collected from the Futian mangrove ecosystem in Shenzhen, China. According to 16S rRNA sequences, 14 actinobacterial strains of the genus Streptomyces, Rhodococcus, Microbacterium, Micromonospora, Actinoplanes and Mycobacterium were isolated and identified. Among these, strain Mycobacterium sp.13 was described as a potential new species belonging to the genus Mycobacterium within the class of actinobacteria according to the genomic analysis. The genome-based 16S rRNA sequences had 98.48% sequence similarity with Mycobacterium moriokaense DSM 44221

Indexed as

Anti-Bacterial AgentsBacterial Typing TechniquesBiological ProductsChinaDNA, BacterialGenome, BacterialMycobacteriumRNA, Ribosomal, 16SSecondary MetabolismSequence Analysis, DNASoil MicrobiologyWetlandsWhole Genome SequencingAnti-Bacterial AgentsBiological ProductsDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID30696899
PMCPMC6351551
OpenAlexW2912420449

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.