Evidence map›Paper›PMID 30696864›Full record

ArticleScientific reports2019

Mycobacterial species and their contribution to cholesterol degradation in wastewater treatment plants.

Feng Guo, Tong Zhang, Bing Li, Zhiping Wang, Feng Ju, Yi-Ting Liang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Feng GuoSchool of Life Sciences, Xiamen University, Xiamen, China. fguo.bio@xmu.edu.cn.
Tong ZhangEnvironmental Biotechnology Laboratory, The University of Hong Kong, Hong Kong SAR, China.
Bing LiKey Laboratory of Microorganism Application and Risk Control of Shenzhen, Graduate School at Shenzhen, Tsinghua University, Shenzhen, China.
Zhiping WangSchool of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, China.
Feng JuEnvironmental Biotechnology Laboratory, The University of Hong Kong, Hong Kong SAR, China.
Yi-Ting LiangSchool of Life Sciences, Xiamen University, Xiamen, China.
University of Hong Kong · HKXiamen University · CNShanghai Jiao Tong University · CNUniversity Town of Shenzhen · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium often presents as an abundant bacterial genus in activated sludge in many wastewater treatment plants (WWTPs), but the species-level taxonomy and functions remain poorly understood. In this study, we profiled the mycobacterial communities in eleven WWTPs from five countries by pyrosequencing the rpoB amplicons and searching against a customized database of mycobacterial rpoB sequences. Results indicated that major mycobacterial species were related to M. brumae, M. crocinum, M. sphagni, etc., most of which belong to poorly characterized rapidly-growing group. A few opportunistic pathogenic species were detected, suggesting the potential risk of mycobacteria in WWTPs. Genomic analysis of four isolates from activated sludge indicated these genomes contained genes of degradations of alkane, aromatics, steroids and a variety of cytochrome P450 families. Additionally, a few key genes responsible for cholesterol degradation were detected in a full-scale activated sludge metatranscriptomic dataset reported previously and taxonomically assigned to mycobacteria. Evidence showed that all isolates can degrade cholesterol, a major composition of sewage. Relative abundance of mycobacteria in activated sludge was enriched by 4.7 folds after adding cholesterol into the influent for one week. Our results provided the insights into mycobacterial species and functions in WWTPs.

Indexed as

CholesterolCytochrome P-450 Enzyme SystemDNA-Directed RNA PolymerasesGenome, BacterialMycobacteriumRNA, Ribosomal, 16SSewageWaste Disposal, FluidCholesterolCytochrome P-450 Enzyme SystemDNA-Directed RNA PolymerasesRNA, Ribosomal, 16SSewage

Identifiers

PMID30696864
PMCPMC6351609
OpenAlexW2912223129

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.