Evidence map›Paper›PMID 30694596›Full record

ArticleChembiochem : a European journal of chemical biology2019

Evolution of C-Terminal Modification Tolerance in Full-Length and Split T7 RNA Polymerase Biosensors.

Jinyue Pu, Michael Disare, Bryan C Dickinson

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Current biosensing strategies based on in vitro T7 RNA polymerase reaction.Biotechnology notes (Amsterdam, Netherlands) · 2025
    Review
  4. Article
  5. Article
  6. Virus-assisted directed evolution of biomolecules.Current opinion in chemical biology · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jinyue PuDepartment of Chemistry, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.ORCID 0000-0002-2314-7190
Michael DisareDepartment of Chemistry, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.
Bryan C DickinsonDepartment of Chemistry, The University of Chicago, 929 E. 57th Street, Chicago, IL, 60637, USA.ORCID 0000-0002-9616-1911

Funding

Rapid selection approaches to understand and reprogram proteins and peptidesR35GM119840 · NIGMS · UNIVERSITY OF CHICAGO · PI Bryan Dickinson · 2016 to 2026
$4.8M
Predoctoral Training Program in Chemistry & BiologyT32GM008720 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY · 1999 to 2020
$4.7M
Split RNA polymerases for sensitive, multidimensional analysis of intercellular PPIs at synapsesRF1MH114102 · NIMH · UNIVERSITY OF CHICAGO · PI DICKINSON, BRYAN, OZKAN, ENGIN · 2017 to 2017
$2.3M
NIGMS NIH HHS R35 GM119840NIGMS NIH HHS T32 GM008720NIMH NIH HHS RF1 MH114102
6 · The paper itself

Abstract

T7 RNA polymerase (RNAP) is a powerful protein scaffold for the construction of synthetic biology tools and biosensors. However, both T7 RNAP and its split variants are intolerant to C-terminal modifications or fusions, thus placing a key limitation on their engineering and deployment. Here, we use rapid continuous-evolution approaches to evolve both full-length and split T7 RNAP variants that tolerate modified C termini and fusions to entire other proteins. Moreover, we show that the evolved split C-terminal RNAP variants can function as small-molecule biosensors, even in the context of large C-terminal fusions. This work provides a panel of modified RNAP variants with robust activity and tolerance to C-terminal fusions, and provides insights into the biophysical requirements of the C-terminal carboxylic acid functional group of T7 RNAP.

Indexed as

Bacteriophage T7Biosensing TechniquesCloning, MolecularDNA-Directed RNA PolymerasesMutationSynthetic BiologyViral Proteinsbacteriophage T7 RNA polymeraseDNA-Directed RNA PolymerasesViral Proteinsbiosensorsdirected evolutionRNAsynthetic biologytranscription

Identifiers

PMID30694596
PMCPMC6570552

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.