Evidence map›Paper›PMID 30694406›Full record

ArticleFunctional & integrative genomics2019

Implication of salt stress induces changes in pigment production, antioxidant enzyme activity, and qRT-PCR expression of genes involved in the biosynthetic pathway of Bixa orellana L.

M Sankari, H Hridya, P Sneha, C George Priya Doss, J Godwin Christopher, Jill Mathew, Hatem Zayed, Siva Ramamoorthy

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Article in Functional & integrative genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

M SankariSchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India.
H HridyaMuga silkworm seed organisation, Central Silk Board, Guwahati, Assam, 781038, India.
P SnehaSchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India.
C George Priya DossSchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India.
J Godwin ChristopherSchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India.
Jill MathewSchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India.
Hatem ZayedDepartment of Biomedical Sciences, College of Health Sciences, Qatar University, Doha, Qatar.
Siva RamamoorthySchool of BioSciences and Technology, VIT, Vellore, Tamil Nadu, 632014, India. siva.ramamoorthy@gmail.com.
Vellore Institute of Technology University · INCentral Muga Eri Research and Training Institute · INQatar University · QA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effect of salt stress on pigment synthesis and antioxidant enzyme activity as well as in the genes involved in the biosynthetic pathway of bixin was studied. The 14-day germinated seedlings of Bixa orellana were induced into the various NaCl concentration (0, 25, 50, 75, 100 mM). After 45 days, leaves were taken for pigment analysis, antioxidant assays, and gene expression analysis to study the response of salt stress. The pigment content such as chlorophyll level was increased upon salt stress with a reduction in total carotenoid clearly indicating the adaptability of plants towards the stressed state. The level of β-carotene was increased in the highest concentration of salt stress treatment. The secondary metabolites such as bixin and abscisic acid (ABA) content were also high in elevated concentration of salt-treated seedling than control. The antioxidant enzyme activity was increased with the highest dose of salt stress suggesting the antioxidant enzymes to protect the plant from the deleterious effects. The mRNA transcript gene of the carotenoid biosynthetic pathway such as phytoene synthase (PSY), 1-deoxyxylulose-5-phosphate synthase (DXS), phytoene desaturase (PDS), beta-lycopene cyclase (LCY-β), epsilon lycopene cyclase (LCY-ε), carboxyl methyl transferase (CMT), aldehyde dehydrogenase (ADH), lycopene cleavage dioxygenase (LCD), and carotenoid cleavage dioxygenase (CCD) showed differential expression pattern under salt stress. In addendum, we studied the co-expression network analysis of gene to assess the co-related genes associated in the biosynthesis pathway of carotenoid. From the co-expression analysis result showed, the LCY, PDS, and PSY genes were closely correlated with other genes. These finding may provide insight to the plants to exist in the stress condition and to improve the industrially important pigment production.

Indexed as

Salt StressTranscriptomeAbscisic AcidBixaceaeCarotenoidsPlant ProteinsAbscisic AcidbixinCarotenoidsPlant ProteinsAntioxidant defense activityBixa orellanaBixin biosynthesisGene expressionSalt stress

Identifiers

PMID30694406
OpenAlexW2913609657

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.