Evidence map›Paper›PMID 30692681›Full record

ArticleNature genetics2019

EZH2 oncogenic mutations drive epigenetic, transcriptional, and structural changes within chromatin domains.

Maria C Donaldson-Collier, Stephanie Sungalee, Marie Zufferey, Daniele Tavernari, Natalya Katanayeva, Elena Battistello, Marco Mina, Kyle M Douglass, Timo Rey, Franck Raynaud and 3 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 165 citations in OpenAlex.

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  17. BMP-ACVR1 Axis is Critical for Efficacy of PRC2 Inhibitors in B-Cell Lymphoma.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  18. Article
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  20. Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Maria C Donaldson-Collier *Swiss Institute for Experimental Cancer Research (ISREC), School of Life Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Stephanie Sungalee *Swiss Institute for Experimental Cancer Research (ISREC), School of Life Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.ORCID http://orcid.org/0000-0001-5633-8826
Marie Zufferey *Department of Computational Biology, University of Lausanne (UNIL), Lausanne, Switzerland.
Daniele Tavernari *Department of Computational Biology, University of Lausanne (UNIL), Lausanne, Switzerland.ORCID http://orcid.org/0000-0001-5981-7363
Natalya KatanayevaSwiss Institute for Experimental Cancer Research (ISREC), School of Life Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.ORCID http://orcid.org/0000-0002-4240-1254
Elena BattistelloSwiss Institute for Experimental Cancer Research (ISREC), School of Life Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Marco MinaDepartment of Computational Biology, University of Lausanne (UNIL), Lausanne, Switzerland.
Kyle M DouglassInstitute of Physics, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Timo ReyInstitute of Physics, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Franck RaynaudDepartment of Computational Biology, University of Lausanne (UNIL), Lausanne, Switzerland.
Suliana ManleyInstitute of Physics, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.ORCID http://orcid.org/0000-0002-4755-4778
Giovanni CirielloDepartment of Computational Biology, University of Lausanne (UNIL), Lausanne, Switzerland. giovanni.ciriello@unil.ch.ORCID http://orcid.org/0000-0003-2021-8683
Elisa OricchioSwiss Institute for Experimental Cancer Research (ISREC), School of Life Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. elisa.oricchio@epfl.ch.ORCID http://orcid.org/0000-0002-1690-0447
École Polytechnique Fédérale de Lausanne · CHSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromatin is organized into topologically associating domains (TADs) enriched in distinct histone marks. In cancer, gain-of-function mutations in the gene encoding the enhancer of zeste homolog 2 protein (EZH2) lead to a genome-wide increase in histone-3 Lys27 trimethylation (H3K27me3) associated with transcriptional repression. However, the effects of these epigenetic changes on the structure and function of chromatin domains have not been explored. Here, we found a functional interplay between TADs and epigenetic and transcriptional changes mediated by mutated EZH2. Altered EZH2 (p.Tyr646* (EZH2

Indexed as

AnimalsCell Line, TumorChromatinDNA MethylationEnhancer of Zeste Homolog 2 ProteinEpigenesis, GeneticEpigenomicsGene Expression Regulation, NeoplasticGene SilencingHistonesHumansMiceMutationPromoter Regions, GeneticTranscription, GeneticChromatinEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanHistones

Identifiers

PMID30692681
OpenAlexW2914809873

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.