Evidence map›Paper›PMID 30692677›Full record

ArticleNature plants2019

Genome structure and evolution of Antirrhinum majus L.

Miaomiao Li, Dongfen Zhang, Qiang Gao, Yingfeng Luo, Hui Zhang, Bin Ma, Chunhai Chen, Annabel Whibley, Yu'e Zhang, Yinghao Cao and 25 more

Abstract read
In one paragraph

Article in Nature plants, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Identification of a candidate self-incompatibility locus in beet (Beta vulgaris).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  11. Review
  12. PSIA: A Comprehensive Knowledgebase of Plant Self-incompatibility.Genomics, proteomics & bioinformatics · 2025
    Article
  13. Multi-omics analysis reveals promiscuousComputational and structural biotechnology journal · 2024
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Expansion and adaptive evolution of theMarine life science & technology · 2023
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

35 authors.

Miaomiao LiState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-2132-6168
Dongfen ZhangState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Qiang GaoState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Yingfeng LuoBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China.
Hui ZhangState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Bin MaState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Chunhai ChenBGI-Shenzhen, Shenzhen, China.
Annabel WhibleyJohn Innes Centre, Norwich, UK.
Yu'e ZhangState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Yinghao CaoState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Qun LiState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Han GuoState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Junhui LiState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Yanzhai SongState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Yue ZhangState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Lucy CopseyJohn Innes Centre, Norwich, UK.
Yan LiState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Xiuxiu LiUniversity of Chinese Academy of Sciences, Beijing, China.
Ming QiState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Jiawei WangNational Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Yan ChenBGI-Shenzhen, Shenzhen, China.
Dan WangBGI-Shenzhen, Shenzhen, China.
Jinyang ZhaoBGI-Shenzhen, Shenzhen, China.
Guocheng LiuBGI-Shenzhen, Shenzhen, China.
Bin WuBGI-Shenzhen, Shenzhen, China.
Lili YuBGI-Shenzhen, Shenzhen, China.
Chunyan XuBGI-Shenzhen, Shenzhen, China.
Jiang LiBGI-Shenzhen, Shenzhen, China.
Shancen ZhaoBGI-Shenzhen, Shenzhen, China.
Yijing ZhangNational Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Songnian HuUniversity of Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-3966-3111
Chengzhi LiangUniversity of Chinese Academy of Sciences, Beijing, China. cliang@genetics.ac.cn.ORCID http://orcid.org/0000-0001-8913-3552
Ye YinBGI-Shenzhen, Shenzhen, China. yinye@genomics.cn.ORCID http://orcid.org/0000-0002-7051-1987
Enrico CoenJohn Innes Centre, Norwich, UK. enrico.coen@jic.ac.uk.ORCID http://orcid.org/0000-0001-8454-8767
Yongbiao XueState Key Laboratory of Plant Cell and Chromosome Engineering and National Center of Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. ybxue@genetics.ac.cn.ORCID http://orcid.org/0000-0002-6895-8472

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9773
6 · The paper itself

Abstract

Snapdragon (Antirrhinum majus L.), a member of the Plantaginaceae family, is an important model for plant genetics and molecular studies on plant growth and development, transposon biology and self-incompatibility. Here we report a near-complete genome assembly of A. majus cultivar JI7 (A. majus cv.JI7) comprising 510 Megabases (Mb) of genomic sequence and containing 37,714 annotated protein-coding genes. Scaffolds covering 97.12% of the assembled genome were anchored on eight chromosomes. Comparative and evolutionary analyses revealed that a whole-genome duplication event occurred in the Plantaginaceae around 46-49 million years ago (Ma). We also uncovered the genetic architectures associated with complex traits such as flower asymmetry and self-incompatibility, identifying a unique duplication of TCP family genes dated to around 46-49 Ma and reconstructing a near-complete ψS-locus of roughly 2 Mb. The genome sequence obtained in this study not only provides a representative genome sequenced from the Plantaginaceae but also brings the popular plant model system of Antirrhinum into the genomic age.

Indexed as

Genome, PlantAntirrhinumBiological EvolutionFlowersGene DuplicationMolecular Sequence AnnotationPhylogenyPlant ProteinsSelf-Incompatibility in Flowering PlantsPlant Proteins

Identifiers

PMID30692677
PMCPMC6784882

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.