Evidence map›Paper›PMID 30692263›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Fanconi anemia protein FANCI functions in ribosome biogenesis.

Samuel B Sondalle, Simonne Longerich, Lisa M Ogawa, Patrick Sung, Susan J Baserga

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
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  6. Article
  7. NBS1 facilitates preribosomal RNA biogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  11. Review
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  18. p53 in the Molecular Circuitry of Bone Marrow Failure Syndromes.International journal of molecular sciences · 2023
    Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Samuel B SondalleDepartment of Genetics, Yale School of Medicine, New Haven, CT 06520.ORCID 0000-0002-4144-9897
Simonne LongerichDepartment of Molecular Biophysics and Biochemistry, Yale School of Medicine, New Haven, CT 06520.
Lisa M OgawaDepartment of Molecular Biophysics and Biochemistry, Yale School of Medicine, New Haven, CT 06520.
Patrick SungDepartment of Molecular Biophysics and Biochemistry, Yale School of Medicine, New Haven, CT 06520.
Susan J BasergaDepartment of Genetics, Yale School of Medicine, New Haven, CT 06520; susan.baserga@yale.edu.ORCID 0000-0002-7731-8629
Yale University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI YASUKO IWAKIRI · 1986 to 2026
$31.1M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
GENETICS AND GENOMICS OF HUMAN DISEASET32HD007149 · NICHD · YALE UNIVERSITY · PI James P Noonan · 1985 to 2026
$8.2M
Mechanistic Dissection of the Fanconi Anemia Pathway of DNA Damage Response and RR01CA168635 · NCI · YALE UNIVERSITY · PI Gary M Kupfer, Patrick Sung · 2013 to 2026
$5.8M
Key factors in human ribosome biogenesisR01GM115710 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 2015 to 2018
$1.6M
The intersection of Alzheimer’s disease and ribosome biogenesis through Amyloid Beta Precursor Protein Binding Family B Member 1 (APBB1; FE65)F31AG058405 · NIA · YALE UNIVERSITY · PI MCLEAN, LISA OGAWA · 2017 to 2020
$128k
Probing the Pathogenesis of North American Indian Childhood Cirrhosis (NAIC)F30DK109582 · NIDDK · YALE UNIVERSITY · PI SONDALLE, SAMUEL BRADY · 2016 to 2017
$57k
NCI NIH HHS R01 CA168635NIA NIH HHS F31 AG058405NICHD NIH HHS T32 HD007149NIDDK NIH HHS F30 DK109582NIDDK NIH HHS P30 DK034989NIGMS NIH HHS R01 GM115710NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Fanconi anemia (FA) is a disease of DNA repair characterized by bone marrow failure and a reduced ability to remove DNA interstrand cross-links. Here, we provide evidence that the FA protein FANCI also functions in ribosome biogenesis, the process of making ribosomes that initiates in the nucleolus. We show that FANCI localizes to the nucleolus and is functionally and physically tied to the transcription of pre-ribosomal RNA (pre-rRNA) and to large ribosomal subunit (LSU) pre-rRNA processing independent of FANCD2. While FANCI is known to be monoubiquitinated when activated for DNA repair, we find that it is predominantly in the deubiquitinated state in the nucleolus, requiring the nucleoplasmic deubiquitinase (DUB) USP1 and the nucleolar DUB USP36. Our model suggests a possible dual pathophysiology for FA that includes defects in DNA repair and in ribosome biogenesis.

Indexed as

Blotting, WesternCell NucleolusDNA RepairElectrophoresis, Polyacrylamide GelFanconi AnemiaFanconi Anemia Complementation Group ProteinsHEK293 CellsHeLa CellsHumansMutationProtein BiosynthesisRibosomesRNA PrecursorsRNA, RibosomalTranscription, GeneticUbiquitinationFANCI protein, humanFanconi Anemia Complementation Group ProteinsRNA PrecursorsRNA, RibosomalFANCIFanconi anemianucleoluspre-ribosomal RNAribosome

Identifiers

PMID30692263
PMCPMC6377447
OpenAlexW2913727950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.