Evidence map›Paper›PMID 30689662›Full record

ArticlePLoS neglected tropical diseases2019

Genetic variation and phylogeography of the Triatoma dimidiata complex evidence a potential center of origin and recent divergence of haplogroups having differential Trypanosoma cruzi and DTU infections.

Angélica Pech-May, Carlos Jesús Mazariegos-Hidalgo, Amaia Izeta-Alberdi, Sury Antonio López-Cancino, Ezequiel Tun-Ku, Keynes De la Cruz-Félix, Carlos N Ibarra-Cerdeña, Raúl E González Ittig, Janine M Ramsey

Abstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
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  7. The Low Variability of Tc24 inPathogens (Basel, Switzerland) · 2023
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  8. Phylogeography ofZooKeys · 2023
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  9. Geometric morphometrics and ecological niche modelling for delimitation ofCurrent research in parasitology & vector-borne diseases · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Angélica Pech-MayInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.
Carlos Jesús Mazariegos-HidalgoInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.
Amaia Izeta-AlberdiInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.
Sury Antonio López-CancinoInstituto de Estudios Superiores de Chiapas, Tuxtla-Gutiérrez, Chiapas, México.
Ezequiel Tun-KuInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.
Keynes De la Cruz-FélixInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.
Carlos N Ibarra-CerdeñaDepartamento de Ecología Humana, Centro de Investigación y de Estudios Avanzados del IPN (CINVESTAV), Unidad Mérida, Yucatán, México.
Raúl E González IttigInstituto de Diversidad y Ecología Animal (IDEA), CONICET-UNC, Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina.
Janine M RamseyInstituto Nacional de Salud Pública /Centro Regional de Investigación en Salud, Tapachula, Chiapas, México.ORCID 0000-0002-5950-0830

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The population genetics of Triatoma dimidiata haplogroups was analyzed at landscape and sub-regional scales in Chiapas and regional level across the Mexican Neotropics, and phylogeography of the complex was re-analyzed across its complete geographic range. Two contiguous fragments of the ND4 gene were analyzed due to bias from differential haplogroup specificity using a previously designed sequence. At both landscape (anthropic modification gradient) and regional (demographic, fragmentation, biogeographic, climate) scales, lowest T. dimidiata genetic diversity occurs where there is greatest historical anthropic modification, and where T. cruzi infection prevalence is significantly highest. Trypanosoma cruzi prevalence was significantly higher than expected in haplogroups 1 and 3, while lower than expected in haplogroup 2. There was also a significant difference of DTUI and DTUVI infection frequencies in both haplogroups 1 and 3, while no difference of either in haplogroup 2. All haplogroups from the Mexican Neotropics had moderate to high haplotype diversity, while greatest genetic differentiation was between haplogroups 1 and 3 (above FST = 0.868, p < 0.0001). Divergence of the complex from the MRCA was estimated between 0.97 MYA (95% HPD interval = 0.55-1.53 MYA) and 0.85 MYA (95% HPD interval = 0.42-1.5 MYA) for ND4A and both concatenated fragments, respectively, with primary divergence from the MRCA of haplogroups 2 and 3. Effective population size for Mexican haplogroups 1 and 2 increased between 0.02 and 0.03 MYA. This study supports previous ecological niche evidence for the complex´s origin surrounding the Tehuantepec Isthmus, and provides evidence for recent divergence of three primary dimidiata haplogroups, with differential T. cruzi infection frequency and DTU specificity, important components of vector capacity.

Indexed as

Genetic VariationAnimalsChagas DiseaseEcosystemHaplotypesHumansInsect ProteinsMexicoNADH DehydrogenasePhylogenyPhylogeographyTriatomaTrypanosoma cruziInsect ProteinsNADH Dehydrogenase

Identifiers

PMID30689662
PMCPMC6366694

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.