Evidence map›Paper›PMID 30689625›Full record

ArticlePLoS computational biology2019

Designing and running an advanced Bioinformatics and genome analyses course in Tunisia.

Fatma Z Guerfali, Dhafer Laouini, Abdellatif Boudabous, Fredj Tekaia

Abstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Fatma Z GuerfaliUniversité Tunis El Manar, Tunis, Tunisia.
Dhafer LaouiniUniversité Tunis El Manar, Tunis, Tunisia.ORCID 0000-0003-1222-4880
Abdellatif BoudabousUniversité Tunis El Manar, Faculté des Sciences de Tunis, Laboratoire Microorganisme et Biomolécules Actives, Campus Universitaire Farhat Heched, El Manar, Tunis, Tunisia.
Fredj TekaiaInstitut Pasteur Paris, 28 rue du Dr Roux, 75724 Paris cedex 15, France.ORCID 0000-0003-1934-2396

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome data, with underlying new knowledge, are accumulating at exponential rate thanks to ever-improving sequencing technologies and the parallel development of dedicated efficient Bioinformatics methods and tools. Advanced Education in Bioinformatics and Genome Analyses is to a large extent not accessible to students in developing countries where endeavors to set up Bioinformatics courses concern most often only basic levels. Here, we report a pioneering pilot experience concerning the design and implementation, from scratch, of a three-months advanced and extensive course in Bioinformatics and Genome Analyses in the Institut Pasteur de Tunis. Most significantly the outcome of the course was upgrading the participants' skills in Bioinformatics and Genome Analyses to recognized international standards. Here we detail the different steps involved in the implementation of this course as well as the topics covered in the program. The description of this pilot experience might be helpful for the implementation of other similar educational projects, notably in developing countries, aiming to go beyond basics and providing young researchers with high-level skills.

Indexed as

CurriculumModels, EducationalAcademies and InstitutesComputational BiologyDeveloping CountriesHumansStudentsTunisia

Identifiers

PMID30689625
PMCPMC6349305

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.