ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019
GWAS analysis of sorghum association panel lines identifies SNPs associated with disease response to Texas isolates of Colletotrichum sublineola.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.
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Who cites it
24 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum.Genetics · 2021Pooled it
- A haplotype-layered GWAS identifies a multi-trait grain mold resistance hub on sorghum chromosome 5.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Candidate genes for anthracnose resistance in Senegalese sorghum: a machine learning-based exploration.Functional & integrative genomics · 2025Article
- Genome-wide association study reveals candidate loci for resistance to anthracnose in blueberry.G3 (Bethesda, Md.) · 2025Article
- Review
- Multi-Trait Genome-Wide Association Studies ofPathogens (Basel, Switzerland) · 2023Article
- Identification and Characterization ofJournal of fungi (Basel, Switzerland) · 2023Article
- A Genome-Wide Association Study of Senegalese Sorghum Seedlings Responding to Pathotype 5 ofPlants (Basel, Switzerland) · 2022Article
- Transcriptome analysis provides insights into the bases of salicylic acid-induced resistance to anthracnose in sorghum.Plant molecular biology · 2022Article
- Genetic mapping of sorghum resistance to an Illinois isolate of Colletotrichum sublineola.The plant genome · 2022Article
- Genome-wide association study of Senegalese sorghum seedlings responding to a Texas isolate of Colletotrichum sublineola.Scientific reports · 2022Article
- Two decades of association mapping: Insights on disease resistance in major crops.Frontiers in plant science · 2022Review
- Sorghum genetic, genomic, and breeding resources.Planta · 2021Review
- The inheritance of anthracnose (Colletotrichum sublineola) resistance in sorghum differential lines QL3 and IS18760.Scientific reports · 2021Article
- Multi-locus genome-wide association studies for five yield-related traits in rice.BMC plant biology · 2021Article
- Validation of a novel associative transcriptomics pipeline in Brassica oleracea: identifying candidates for vernalisation response.BMC genomics · 2021Article
- Genome-wide association analysis for response of Senegalese sorghum accessions to Texas isolates of anthracnose.The plant genome · 2021Article
- RNA-Sequencing in Resistant (QL3) and Susceptible (Theis) Sorghum Cultivars Inoculated With Johnsongrass Isolates ofFrontiers in genetics · 2021Article
- Genome-wide association analysis of anthracnose resistance in sorghum [Sorghum bicolor (L.) Moench].PloS one · 2021Article
- Genotyping by Sequencing-Based Discovery of SNP Markers and Construction of Linkage Map from FBioMed research international · 2021Article
Corrections and comments
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Authors and funding
4 authors.
Funding
Abstract
key messageSNPs identify prospective genes related to response to Colletotrichum sublineola (anthracnose) in the sorghum association panel lines. Sorghum association panel (SAP) lines were scored over several years for response to Colletotrichum sublineola, the causal agent of the disease anthracnose. Known resistant and susceptible lines were included each year to verify successful inoculation. Over 79,000 single-nucleotide polymorphic (SNP) loci from a publicly available genotype by sequencing dataset available for the SAP lines were used with TASSEL association mapping software to identify chromosomal locations associated with differences in disease response. When the top-scoring SNPs were mapped to the published sorghum genome, in each case, the nearest annotated gene has precedence for a role in host defense.
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