Evidence map›Paper›PMID 30684492›Full record

ArticleiScience2019

Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae.

David R Nelson, Amphun Chaiboonchoe, Weiqi Fu, Khaled M Hazzouri, Ziyuan Huang, Ashish Jaiswal, Sarah Daakour, Alexandra Mystikou, Marc Arnoux, Mehar Sultana and 1 more

Abstract read
In one paragraph

Article in iScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Response of aBiology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

David R NelsonCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE.
Amphun ChaiboonchoeDivision of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE.
Weiqi FuDivision of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE.
Khaled M HazzouriKhalifa Center for Genetic Engineering and Biotechnology (KCGEB), United Arab Emirates University, Al-Ain, UAE.
Ziyuan HuangDepartment of Computer Science, New York University Shanghai, Shanghai, China.
Ashish JaiswalDivision of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE.
Sarah DaakourCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE.
Alexandra MystikouCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE.
Marc ArnouxCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE.
Mehar SultanaCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE.
Kourosh Salehi-AshtianiCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE; Division of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE. Electronic address: ksa3@nyu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The activities of microalgae support nutrient cycling that helps to sustain aquatic and terrestrial ecosystems. Most microalgal species, especially those from the subtropics, are genomically uncharacterized. Here we report the isolation and genomic characterization of 22 microalgal species from subtropical coastal regions belonging to multiple clades and three from temperate areas. Halotolerant strains including Halamphora, Dunaliella, Nannochloris, and Chloroidium comprised the majority of these isolates. The subtropical-based microalgae contained arrays of methyltransferase, pyridine nucleotide-disulfide oxidoreductase, abhydrolase, cystathionine synthase, and small-molecule transporter domains present at high relative abundance. We found that genes for sulfate transport, sulfotransferase, and glutathione S-transferase activities were especially abundant in subtropical, coastal microalgal species and halophytic species in general. Our metabolomics analyses indicate lineage- and habitat-specific sets of biomolecules implicated in niche-specific biological processes. This work effectively expands the collection of available microalgal genomes by ∼50%, and the generated resources provide perspectives for studying halophyte adaptive traits.

Indexed as

AlgologyGenomicsGlobal Nutrient CycleMetabolomics

Identifiers

PMID30684492
PMCPMC6348204

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.