Evidence map›Paper›PMID 30684124›Full record

ArticleJournal of industrial microbiology & biotechnology2019

Toward a global picture of bacterial secondary metabolism.

Mohammad R Seyedsayamdost

Abstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

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  7. Discovery of a Novel Antimicrobial Peptide fromAntibiotics (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Mohammad R SeyedsayamdostDepartment of Chemistry, Princeton University, Princeton, NJ, 08544, USA. mrseyed@princeton.edu.ORCID http://orcid.org/0000-0003-2707-4854

Funding

Implementing Innovative Approaches to Access the Hidden Metabolomes of BacteriaDP2AI124786 · NIAID · PRINCETON UNIVERSITY · PI SEYEDSAYAMDOST, MOHAMMAD R · 2015 to 2015
$2.3M
Foundation for the National Institutes of Health DP2-AI-124786NIAID NIH HHS DP2 AI124786
6 · The paper itself

Abstract

Bacterial metabolism is comprised of primary metabolites, the intracellular molecules of life that enable growth and proliferation, and secondary metabolites, predominantly extracellular molecules that facilitate a microbe's interaction with its environment. While our knowledge of primary metabolism and its web of interconnected intermediates is quantitative and holistic, significant knowledge gaps remain in our understanding of the secondary metabolomes of bacteria. In this Perspective, I discuss the main challenges involved in obtaining a global, comprehensive picture of bacterial secondary metabolomes, specifically in biosynthetically "gifted" microbes. Recent methodological advances that can meet these challenges will be reviewed. Applications of these methods combined with ongoing innovations will enable a detailed picture of global secondary metabolomes, which will in turn shed light onto the biology, chemistry, and enzymology underlying natural products and simultaneously aid drug discovery.

Indexed as

Secondary MetabolismAnti-Bacterial AgentsBacteriaBiological ProductsBiosynthetic PathwaysComputational BiologyDrug DiscoveryGenome, MicrobialHigh-Throughput Nucleotide SequencingMicrobial InteractionsMultigene FamilyAnti-Bacterial AgentsBiological ProductsHiTESMolecular networkingNatural productsSecondary metabolismSilent gene clusters

Identifiers

PMID30684124
PMCPMC6779422

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.