ArticleNature communications2019
Chromosome conformation capture resolved near complete genome assembly of broomcorn millet.
Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.
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Who cites it
61 citing papers in PubMed, 135 citations in OpenAlex.
- Development of fragrant broomcorn millet (Panicum miliaceum L.) via CRISPR/Cas12i.3-mediated genome editing.Journal of integrative plant biology · 2026Article
- Deciphering plant stress resilience in different millet crops: from multi-omics discoveries to predictive breeding for climate-resilient crop enhancement.Frontiers in plant science · 2026Review
- Structural and deleterious burdens and their effects on yield traits in foxtail millet domestication.iScience · 2025Article
- Comprehensive analysis of the sucrose nonfermenting 1-related protein kinase 2 gene family in broomcorn millet (Panicum miliaceum L.) under abiotic stress conditions.BMC genomics · 2025Article
- Advances in Functional Genomics for Exploring Abiotic Stress Tolerance Mechanisms in Cereals.Plants (Basel, Switzerland) · 2025Review
- Genome-Wide Identification and Analysis of bZIP Transcription Factor Gene Family in Broomcorn Millet (Genes · 2025Article
- Review
- A genome-wide association study reveals the genetic architecture of 19 agronomic traits in broomcorn millet (Panicum miliaceum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Comparative analysis using a chromosome-scale genome assembly for Funaria hygrometrica suggests greater collinearity in mosses than in seed plants.Communications biology · 2025Article
- Genetic diversity analysis of proso millet (Frontiers in plant science · 2025Article
- Genomic resources, opportunities, and prospects for accelerated improvement of millets.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Review
- The genome of Eleocharis vivipara elucidates the genetics of CJournal of integrative plant biology · 2024Article
- Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.).Scientific reports · 2024Article
- A reference-grade genome of the xerophyte Ammopiptanthus mongolicus sheds light on its evolution history in legumes and drought-tolerance mechanisms.Plant communications · 2024Article
- Article
- A complete reference genome of broomcorn millet.Scientific data · 2024Article
- The chromosome-level assembly of the wild diploid alfalfa genome provides insights into the full landscape of genomic variations between cultivated and wild alfalfa.Plant biotechnology journal · 2024Article
- Omics-driven utilization of wild relatives for empowering pre-breeding in pearl millet.Planta · 2024Review
- Genomic variation in weedy and cultivated broomcorn millet accessions uncovers the genetic architecture of agronomic traits.Nature genetics · 2024Article
- Chromosome-level genome assembly of the predatory stink bug Arma custos.Scientific data · 2024Article
1 more citing papers are in PubMed but not listed here.
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Authors and funding
16 authors at 5 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Broomcorn millet (Panicum miliaceum L.) has strong tolerance to abiotic stresses, and is probably one of the oldest crops, with its earliest cultivation that dated back to ca. ~10,000 years. We report here its genome assembly through a combination of PacBio sequencing, BioNano, and Hi-C (in vivo) mapping. The 18 super scaffolds cover ~95.6% of the estimated genome (~887.8 Mb). There are 63,671 protein-coding genes annotated in this tetraploid genome. About ~86.2% of the syntenic genes in foxtail millet have two homologous copies in broomcorn millet, indicating rare gene loss after tetraploidization in broomcorn millet. Phylogenetic analysis reveals that broomcorn millet and foxtail millet diverged around ~13.1 Million years ago (Mya), while the lineage specific tetraploidization of broomcorn millet may be happened within ~5.91 million years. The genome is not only beneficial for the genome assisted breeding of broomcorn millet, but also an important resource for other Panicum species.
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