Evidence map›Paper›PMID 30683937›Full record

ArticleNature protocols2019

Ex vivo and in vivo stable isotope labelling of central carbon metabolism and related pathways with analysis by LC-MS/MS.

Min Yuan, Daniel M Kremer, He Huang, Susanne B Breitkopf, Issam Ben-Sahra, Brendan D Manning, Costas A Lyssiotis, John M Asara

Open access · greenAbstract read
In one paragraph

Article in Nature protocols, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 1 synthesis or guideline pooled it, 154 citations in OpenAlex.

  1. The cellular model for Alzheimer's disease research: PC12 cells.Frontiers in molecular neuroscience · 2022
    Pooled it
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29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Min YuanDivision of Signal Transduction, Beth Israel Deaconess Medical Center, Boston, MA, USA.
Daniel M KremerRogel Cancer Center, University of Michigan, Ann Arbor, MI, USA.
He HuangDivision of Signal Transduction, Beth Israel Deaconess Medical Center, Boston, MA, USA.
Susanne B BreitkopfDivision of Signal Transduction, Beth Israel Deaconess Medical Center, Boston, MA, USA.
Issam Ben-SahraDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
Brendan D ManningDepartment of Genetics and Complex Diseases, Harvard School of Public Health, Boston, MA, USA.
Costas A LyssiotisRogel Cancer Center, University of Michigan, Ann Arbor, MI, USA. clyssiot@med.umich.edu.ORCID http://orcid.org/0000-0001-9309-6141
John M AsaraDivision of Signal Transduction, Beth Israel Deaconess Medical Center, Boston, MA, USA. jasara@bidmc.harvard.edu.
Beth Israel Deaconess Medical Center · USUniversity of Michigan · USHarvard University · USNorthwestern University · US

Funding

VectorP30CA006516 · NCI · DANA-FARBER CANCER INSTITUTE · PI JENNIFER W MACK · 1985 to 2026
$330.6M
Tuberous Sclerosis-Pathway and PathogenesisP01CA120964 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI David J. Kwiatkowski · 2007 to 2026
$35.9M
Decoding and Targeting the PI3K-mTOR Signaling Network in CancerR35CA197459 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI BRENDAN D. MANNING · 2015 to 2026
$10.8M
NCI NIH HHS P01 CA120964NCI NIH HHS P30 CA006516NCI NIH HHS R35 CA197459NIH HHS 5P01CA120964NIH HHS 5P30CA006516NIH HHS 5R35CA197459
6 · The paper itself

Abstract

Targeted tandem mass spectrometry (LC-MS/MS) has been extremely useful for profiling small molecules extracted from biological sources, such as cells, bodily fluids and tissues. Here, we present a protocol for analysing incorporation of the non-radioactive stable isotopes carbon-13 (

Indexed as

AnimalsCarbon CycleCarbon IsotopesCell Line, TumorChromatography, High Pressure LiquidGlucoseGlutamineHumansIsotope LabelingK562 CellsMetabolic Networks and PathwaysMiceMultiple MyelomaNitrogen IsotopesTandem Mass SpectrometryCarbon-13Carbon IsotopesGlucoseGlutamineNitrogen-15Nitrogen Isotopes

Identifiers

PMID30683937
PMCPMC7382369
OpenAlexW2912121921

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.