Evidence map›Paper›PMID 30682149›Full record

ArticlePloS one2019

Effect of Sec61 interaction with Mpd1 on endoplasmic reticulum-associated degradation.

Fabio Pereira, Mandy Rettel, Frank Stein, Mikhail M Savitski, Ian Collinson, Karin Römisch

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Fabio PereiraFaculty of Natural Sciences and Technology, Saarland University, Saarbruecken, Germany.
Mandy RettelProteomics Core Facility, EMBL, Heidelberg, Germany.ORCID 0000-0002-8304-3385
Frank SteinProteomics Core Facility, EMBL, Heidelberg, Germany.ORCID 0000-0001-9695-1692
Mikhail M SavitskiProteomics Core Facility, EMBL, Heidelberg, Germany.
Ian CollinsonSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.
Karin RömischFaculty of Natural Sciences and Technology, Saarland University, Saarbruecken, Germany.ORCID 0000-0003-0415-6558
European Molecular Biology Organization · DESaarland University · DEUniversity of Bristol · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L01386X/1Biotechnology and Biological Sciences Research Council BB/M003604/1Biotechnology and Biological Sciences Research Council BB/N015126/1
6 · The paper itself

Abstract

Proteins that misfold in the endoplasmic reticulum (ER) are transported back to the cytosol for ER-associated degradation (ERAD). The Sec61 channel is one of the candidates for the retrograde transport conduit. Channel opening from the ER lumen must be triggered by ERAD factors and substrates. Here we aimed to identify new lumenal interaction partners of the Sec61 channel by chemical crosslinking and mass spectrometry. In addition to known Sec61 interactors we detected ERAD factors including Cue1, Ubc6, Ubc7, Asi3, and Mpd1. We show that the CPY* ERAD factor Mpd1 binds to the lumenal Sec61 hinge region. Deletion of the Mpd1 binding site reduced the interaction between both proteins and caused an ERAD defect specific for CPY* without affecting protein import into the ER or ERAD of other substrates. Our data suggest that Mpd1 binding to Sec61 is a prerequisite for CPY* ERAD and confirm a role of Sec61 in ERAD of misfolded secretory proteins.

Indexed as

Endoplasmic Reticulum-Associated DegradationEndoplasmic ReticulumProtein BindingProtein Disulfide-IsomerasesRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSEC Translocation ChannelsMPD1 protein, S cerevisiaeProtein Disulfide-IsomerasesRepressor ProteinsSaccharomyces cerevisiae ProteinsSEC61 protein, S cerevisiaeSEC Translocation Channels

Identifiers

PMID30682149
PMCPMC6347170
OpenAlexW2889770788

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.