Evidence map›Paper›PMID 30679815›Full record

ArticleEuropean journal of human genetics : EJHG2019

Exome sequencing of fetal anomaly syndromes: novel phenotype-genotype discoveries.

Nicole Meier, Elisabeth Bruder, Olav Lapaire, Irene Hoesli, Anjeung Kang, Jürgen Hench, Sylvia Hoeller, Julie De Geyter, Peter Miny, Karl Heinimann and 3 more

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Genetic Profiling of Polymicrogyria in a South Indian Cohort.Annals of Indian Academy of Neurology · 2025
    Article
  10. Review
  11. Recurrent status epilepticus and severe bifrontal hypometabolism in PGAP1-related neurodevelopmental disorder.Epileptic disorders : international epilepsy journal with videotape · 2025
    Article
  12. In-Depth Phenotyping ofBiomolecules · 2024
    Article
  13. Lethal phenotypes in Mendelian disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  14. Article
  15. Review
  16. Lethal phenotypes in Mendelian disorders.medRxiv : the preprint server for health sciences · 2024
    Article
  17. Review
  18. Essential genes: a cross-species perspective.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Nicole MeierMedical Genetics, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland.
Elisabeth BruderUniversity of Basel, Basel, Switzerland.
Olav LapaireDepartment of Obstetrics and Gynecology, University Hospital Basel, Basel, Switzerland.
Irene HoesliDepartment of Obstetrics and Gynecology, University Hospital Basel, Basel, Switzerland.
Anjeung KangCentre for Prenatal Ultrasound, Freie Strasse, Basel, Switzerland.
Jürgen HenchPathology, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland.
Sylvia HoellerUniversity of Basel, Basel, Switzerland.
Julie De GeyterMedical Genetics, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland.
Peter MinyMedical Genetics, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland.
Karl HeinimannMedical Genetics, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland.
Rabih ChaouiCentre for Prenatal Diagnosis, Friedrichstrasse, Berlin, Germany.
Sevgi TercanliUniversity of Basel, Basel, Switzerland.
Isabel FilgesMedical Genetics, Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland. Isabel.filges@usb.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The monogenic etiology of most severe fetal anomaly syndromes is poorly understood. Our objective was to use exome sequencing (ES) to increase our knowledge on causal variants and novel candidate genes associated with specific fetal phenotypes. We employed ES in a cohort of 19 families with one or more fetuses presenting with a distinctive anomaly pattern and/or phenotype recurrence at increased risk for lethal outcomes. Candidate variants were identified in 12 families (63%); in 6 of them a definite diagnosis was achieved including known or novel variants in recognized disease genes (MKS1, OTX2, FGFR2, and RYR1) and variants in novel disease genes describing new fetal phenotypes (CENPF, KIF14). We identified variants likely causal after clinical and functional review (SMAD3, KIF4A, and PIGW) and propose novel candidate genes (PTK7, DNHD1, and TTC28) for early human developmental disease supported by functional and cross-species phenotyping evidence. We describe rare and novel fetal anomaly syndromes and highlight the diagnostic utility of ES, but also its contribution to discovery. The diagnostic yield of the future application of prenatal ES will depend on our ability to increase our knowledge on the specific phenotype-genotype correlations during fetal development.

Indexed as

Exome SequencingGenetic Association StudiesAbnormalities, MultipleChildExomeFetusHumansMutationPhenotypeSyndrome

Identifiers

PMID30679815
PMCPMC6461982

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.