Evidence map›Paper›PMID 30679636›Full record

ArticleScientific reports2019

The co-transfer of plasmid-borne colistin-resistant genes mcr-1 and mcr-3.5, the carbapenemase gene bla

Haiyan Long, Yu Feng, Ke Ma, Lu Liu, Alan McNally, Zhiyong Zong

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Cross-species transmission ofFrontiers in cellular and infection microbiology · 2026
    Review
  5. Article
  6. Article
  7. Detection ofMicroorganisms · 2024
    Article
  8. Genetic characteristic of coexisting ofFrontiers in microbiology · 2023
    Article
  9. Article
  10. More thanFrontiers in cellular and infection microbiology · 2023
    Article
  11. Review
  12. Colistin Resistance Mechanisms in HumanAntibiotics (Basel, Switzerland) · 2022
    Article
  13. Global epidemiology, genetic environment, risk factors and therapeutic prospects ofFrontiers in cellular and infection microbiology · 2022
    Review
  14. Genetic Characterization of Colistin-ResistantInfection and drug resistance · 2022
    Article
  15. Article
  16. Colistin resistance and plasmid-mediatedJournal of veterinary science · 2021
    Article
  17. Colistin Resistance and ESBL Production inAntibiotics (Basel, Switzerland) · 2021
    Article
  18. The Phylogenetic Structure of Reptile, Avian and UropathogenicInternational journal of molecular sciences · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Haiyan LongCenter of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.
Yu FengCenter of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.ORCID 0000-0002-5654-4256
Ke MaCenter of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.
Lu LiuCenter of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.
Alan McNallyInstitute of Microbiology and Infection, College of Medical and Dental Sciences, University of Birmingham, Birmingham, UK.ORCID 0000-0002-3099-630X
Zhiyong ZongCenter of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China. zongzhiy@scu.edu.cn.
Sichuan University · CNUniversity of Birmingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We found an unusual Escherichia coli strain with resistance to colistin, carbapenem and amikacin from sewage. We therefore characterized the strain and determined the co-transfer of the resistance determinants. Whole genome sequencing was performed using both Illumina HiSeq X10 and MinION sequencers. Short and long reads were subjected to de novo hybrid assembly. Sequence type, antimicrobial resistance genes and plasmid replicons were identified from the genome sequences. Phylogenetic analysis of all IncHI2 plasmids carrying mcr-1 available in GenBank was performed based on core genes. Conjugation experiments were performed. mcr-3.5 was cloned into E. coli DH5α. The strain belonged to ST410, a type with a global distribution. Two colistin-resistant genes, mcr-1.1 and mcr-3.5, a carbapenemase gene bla

Indexed as

Drug Resistance, BacterialAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesColistinConjugation, GeneticEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGene Expression Regulation, BacterialGenome, BacterialHumansMethyltransferasesMicrobial Sensitivity TestsPhylogenyPlasmidsAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasescarbapenemaseColistinEscherichia coli ProteinsMCR-1 protein, E coliMCR-3 protein, E coliMethyltransferasesRmtB protein, E coliTransferases (Other Substituted Phosphate Groups)

Identifiers

PMID30679636
PMCPMC6346057
OpenAlexW2912304061

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.