Evidence map›Paper›PMID 30679566›Full record

ArticleScientific reports2019

Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect.

Pierre Plassart, Nicolas Chemidlin Prévost-Bouré, Stéphane Uroz, Samuel Dequiedt, Dorothy Stone, Rachel Creamer, Robert I Griffiths, Mark J Bailey, Lionel Ranjard, Philippe Lemanceau

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Biodiversity in mountain soils above the treeline.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. International journal of systematic and evolutionary microbiology · 2024
    Article
  13. Short impact on soil microbiome of aFrontiers in plant science · 2024
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Pierre PlassartAgroécologie, AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
Nicolas Chemidlin Prévost-BouréAgroécologie, AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
Stéphane UrozUMR 1136 Interactions Arbres Micro-organismes, INRA Univ Lorraine, F-54280, Champenoux, France.
Samuel DequiedtAgroécologie, AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
Dorothy StoneTEAGASC, Johnstown Castle, Wexford, Ireland.
Rachel CreamerTEAGASC, Johnstown Castle, Wexford, Ireland.ORCID 0000-0003-3617-1357
Robert I GriffithsCentre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, UK.ORCID 0000-0002-3341-4547
Mark J BaileyCentre for Ecology & Hydrology, Benson Lane, Crowmarsh Gifford, Wallingford, UK.
Lionel RanjardAgroécologie, AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
Philippe LemanceauAgroécologie, AgroSup Dijon, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France. philippe.lemanceau@inra.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To better understand the relationship between soil bacterial communities, soil physicochemical properties, land use and geographical distance, we considered for the first time ever a European transect running from Sweden down to Portugal and from France to Slovenia. We investigated 71 sites based on their range of variation in soil properties (pH, texture and organic matter), climatic conditions (Atlantic, alpine, boreal, continental, Mediterranean) and land uses (arable, forest and grassland). 16S rRNA gene amplicon pyrosequencing revealed that bacterial communities highly varied in diversity, richness, and structure according to environmental factors. At the European scale, taxa area relationship (TAR) was significant, supporting spatial structuration of bacterial communities. Spatial variations in community diversity and structure were mainly driven by soil physicochemical parameters. Within soil clusters (k-means approach) corresponding to similar edaphic and climatic properties, but to multiple land uses, land use was a major driver of the bacterial communities. Our analyses identified specific indicators of land use (arable, forest, grasslands) or soil conditions (pH, organic C, texture). These findings provide unprecedented information on soil bacterial communities at the European scale and on the drivers involved; possible applications for sustainable soil management are discussed.

Indexed as

Soil MicrobiologyBacteriaBiodiversityEuropeForestsGrasslandHydrogen-Ion ConcentrationOrganic ChemicalsRNA, Ribosomal, 16SSoilOrganic ChemicalsRNA, Ribosomal, 16SSoil

Identifiers

PMID30679566
PMCPMC6345909

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.