Evidence map›Paper›PMID 30679523›Full record

ArticleScientific reports2019

The highly GABARAP specific rat monoclonal antibody 8H5 visualizes GABARAP in immunofluorescence imaging at endogenous levels.

Indra M Simons, Jeannine Mohrlüder, Regina Feederle, Elisabeth Kremmer, Thomas Zobel, Jochen Dobner, Nicole Bleffert, Silke Hoffmann, Dieter Willbold

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Inhibition of GABARAP or GABARAPL1 prevents aminoglycoside- induced hearing loss.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Indra M SimonsInstitut für Physikalische Biologie, Heinrich-Heine-Universität, 40225, Düsseldorf, Germany.
Jeannine MohrlüderInstitute of Complex Systems, Structural Biochemistry (ICS-6), Forschungszentrum Jülich, 52425, Jülich, Germany.
Regina FeederleInstitute for Diabetes and Obesity, Monoclonal Antibody Core Facility, 85764, Neuherberg, Germany.
Elisabeth KremmerInstitute for Molecular Immunology, Helmholtz Center Munich, German Research Center for Environmental Health, 85764, Neuherberg, Germany.
Thomas ZobelDepartment of Biology, Center for Advanced Imaging (CAi), Heinrich-Heine-Universität, 40225, Düsseldorf, Germany.
Jochen DobnerInstitut für Physikalische Biologie, Heinrich-Heine-Universität, 40225, Düsseldorf, Germany.
Nicole BleffertInstitut für Physikalische Biologie, Heinrich-Heine-Universität, 40225, Düsseldorf, Germany.
Silke HoffmannInstitute of Complex Systems, Structural Biochemistry (ICS-6), Forschungszentrum Jülich, 52425, Jülich, Germany. si.hoffmann@fz-juelich.de.
Dieter WillboldInstitut für Physikalische Biologie, Heinrich-Heine-Universität, 40225, Düsseldorf, Germany. dieter.willbold@uni-duesseldorf.de.ORCID 0000-0002-0065-7366
Heinrich Heine University Düsseldorf · DEForschungszentrum Jülich · DEGerman Center for Diabetes Research · DEHelmholtz Zentrum München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The determination of unique functions of GABARAP (gamma-aminobutyric acid type A receptor-associated protein), a member of the highly conserved protein family of mammalian autophagy-related 8 protein (mATG8), within diverse cellular processes remains challenging. Because available anti-GABARAP antibodies perform inadequate, especially within various microscopy-based applications, we aimed to develop an antibody that targets GABARAP but not its close orthologs. Following the latest recommendations for antibody validation including fluorescence protein tagging, genetic and orthogonal strategies, we characterized the resulting anti-GABARAP (8H5) antibody during confocal immunofluorescence imaging in-depth. We compared the antibody staining pattern with that obtained for fluorescence protein tagged GABARAP, GABARAPL1 or GABARAPL2 each ectopically expressed in GABARAP knockout cells. Furthermore, we imaged cells expressing all mATG8 family members at endogenous levels and checked GABARAP knockout cells for unspecific staining under fed or macroautophagy-inducing conditions. Finally, we simultaneously stained cells for endogenous GABARAP and the common autophagosomal marker LC3B. Summarized, the presented antibody shows high specificity for GABARAP without cross-reactivity to other mATG8 family members in immunofluorescence imaging making it a valuable tool for the identification of unique GABARAP functions.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalApoptosis Regulatory ProteinsCell LineFluorescent Antibody TechniqueHumansMicrotubule-Associated ProteinsOptical ImagingRatsAntibodies, MonoclonalApoptosis Regulatory ProteinsGABARAP protein, humanMicrotubule-Associated Proteins

Identifiers

PMID30679523
PMCPMC6346085
OpenAlexW2919203034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.