Evidence map›Paper›PMID 30678654›Full record

ArticleMolecular medicine (Cambridge, Mass.)2019

Molecular expression, characterization and mechanism of ALAS2 gain-of-function mutants.

Vassili Tchaikovskii, Robert J Desnick, David F Bishop

Open access · goldAbstract read
In one paragraph

Article in Molecular medicine (Cambridge, Mass.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Transcriptomics of early responses to purifiedFrontiers in immunology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Porphyrias in the Age of Targeted Therapies.Diagnostics (Basel, Switzerland) · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vassili TchaikovskiiDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai New York, New York, 10029, USA.
Robert J DesnickDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai New York, New York, 10029, USA.
David F BishopDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai New York, New York, 10029, USA. dfbishop@earthlink.net.ORCID 0000-0003-1958-8601
Icahn School of Medicine at Mount Sinai · US

Funding

STUDIES OF PORPHYRIA AND HUMAN HEME BIOSYNTHESISR01DK026824 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DESNICK, ROBERT J · 1986 to 2010
$2.4M
NIDDK NIH HHS R01 DK026824
6 · The paper itself

Abstract

backgroundX-linked protoporphyria (XLP) (MIM 300752) is an erythropoietic porphyria due to gain-of-function mutations in the last exon (Ducamp et al., Hum Mol Genet 22:1280-88, 2013) of the erythroid-specific aminolevulinate synthase gene (ALAS2). Five ALAS2 exon 11 variants identified by the NHBLI Exome sequencing project (p.R559H, p.E565D, p.R572C, p.S573F and p.Y586F) were expressed, purified and characterized in order to assess their possible contribution to XLP. To further characterize the XLP gain-of-function region, five novel ALAS2 truncation mutations (p.P561X, p.V562X, p.H563X, p.E569X and p.F575X) were also expressed and studied.

methodsSite-directed mutagenesis was used to generate ALAS2 mutant clones and all were prokaryotically expressed, purified to near homogeneity and characterized by protein and enzyme kinetic assays. Standard deviations were calculated for 3 or more assay replicates.

resultsThe five ALAS2 single nucleotide variants had from 1.3- to 1.9-fold increases in succinyl-CoA V

conclusionsPatients with porphyrias should always be assessed for the presence of the ALAS2 gain-of-function modifier variants identified here. A key region of the ALAS2 carboxyterminal region is identified by the truncation mutations studied here and the correlation of increased thermolability with activity suggests that increased molecular flexibility/active site openness is the mechanism of enhanced function of mutations in this region providing further insights into the role of the carboxyl-terminal region of ALAS2 in the regulation of erythroid heme synthesis.

Indexed as

Gain of Function Mutation5-Aminolevulinate SynthetaseEnzyme StabilityExonsKineticsPolymorphism, Single Nucleotide5-Aminolevulinate SynthetaseALAS2 protein, humanErythropoieticGlycine; succinyl-coenzyme aPolymorphismPorphyriaSingle nucleotideX-linked sideroblastic anemia

Identifiers

PMID30678654
PMCPMC6344999
OpenAlexW2938322338

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.