ArticleIEEE transactions on bio-medical engineering2019
Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study.
Article in IEEE transactions on bio-medical engineering, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
9 citing papers in PubMed.
- A spatially discretized convolutional neural mass model for studying meso-scale spatio-temporal transformations in the rat hippocampus.Journal of computational neuroscience · 2026Article
- A spatially discretized convolutional neural mass model for studying meso-scale spatio-temporal transformations in the rat hippocampus.Research square · 2026Article
- ReBaCCA-ss: Relevance-Balanced Continuum Correlation Analysis With Smoothing and Surrogating for Quantifying Similarity Between Population Spiking Activities.Neural computation · 2026Article
- Article
- A Continuous Attractor Model with Realistic Neural and Synaptic Properties Quantitatively Reproduces Grid Cell Physiology.International journal of molecular sciences · 2024Article
- Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics.Frontiers in computational neuroscience · 2021Article
- Topographic Organization of Correlation Along the Longitudinal and Transverse Axes in Rat Hippocampal CA3 Due to Excitatory Afferents.Frontiers in computational neuroscience · 2020Article
- Generation of Granule Cell Dendritic Morphologies by Estimating the Spatial Heterogeneity of Dendritic Branching.Frontiers in computational neuroscience · 2020Article
- Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
objectiveThe network architecture connecting neural regions is defined by the organization and anatomical properties of the projecting axons, but its contributions to neural encoding and system function are difficult to study experimentally.
methodsUsing a large-scale, spiking neuronal network model of rat dentate gyrus, the role of the anatomy of the entorhinal-dentate axonal projection was evaluated in the context of spatial encoding by incorporating grid cell activity to provide physiological, spatially-correlated input. The dorso-ventral extents of the entorhinal axon terminal fields were varied to generate different feedforward architectures, and the resulting spatial representations and spatial information scores of the network were evaluated. Position was decoded from the population activity using a point process filter to investigate the contributions of network architecture on spatial encoding.
resultsThe model predicted the emergence of anatomical gradients within the dentate gyrus for place field size and spatial information along its dorso-ventral axis, which were dependent on the extents of the entorhinal axon terminal fields. The decoding results revealed an optimal performance at an axon terminal field extent of 2 mm that lies within the biological range.
conclusionThe axonal anatomy mediates a tradeoff between encoding multiple place field sizes or achieving a high spatial information score, and the combination of both properties is necessary to maximize spatial encoding by a network. SIGNIFICANCE: In total, this paper establishes a mechanistic neuronal network model that, in concert with information-theoretic and statistical methods, can be used to investigate how lower level properties contribute to higher level function.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.