Evidence map›Paper›PMID 30675999›Full record

ArticleMolecular genetics & genomic medicine2019

De novo and inherited pathogenic variants in collagen-related osteogenesis imperfecta.

Lidiia Zhytnik, Katre Maasalu, Binh Ho Duy, Andrey Pashenko, Sergey Khmyzov, Ene Reimann, Ele Prans, Sulev Kõks, Aare Märtson

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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  7. Case Report: A novelFrontiers in endocrinology · 2023
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  9. Comparing Clinical and Genetic Characteristics ofFrontiers in endocrinology · 2022
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Lidiia ZhytnikDepartment of Traumatology and Orthopedics, University of Tartu, Tartu, Estonia.ORCID 0000-0003-4682-0402
Katre MaasaluDepartment of Traumatology and Orthopedics, University of Tartu, Tartu, Estonia.
Binh Ho DuyHue University of Medicine and Pharmacy, Hue University, Hue, Vietnam.
Andrey PashenkoDepartment of Pediatric Orthopedics, Sytenko Institute of Spine and Joint Pathology, AMS Ukraine, Kharkiv, Ukraine.
Sergey KhmyzovDepartment of Pediatric Orthopedics, Sytenko Institute of Spine and Joint Pathology, AMS Ukraine, Kharkiv, Ukraine.
Ene ReimannCentre of Translational Medicine, University of Tartu, Tartu, Estonia.
Ele PransDepartment of Pathophysiology, University of Tartu, Tartu, Estonia.
Sulev KõksCentre for Comparative Genomics, Murdoch University, Perth, Australia.
Aare MärtsonDepartment of Traumatology and Orthopedics, University of Tartu, Tartu, Estonia.
University of Tartu · EESytenko Institute of Spine and Joint Pathology of the National Academy of Medical Sciences of Ukraine · UATartu University Hospital · EEHue University · VNMurdoch University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOsteogenesis imperfecta (OI) is a rare genetic bone fragility disorder. In the current study, differences between the genotypes and phenotypes of de novo and inherited collagen-related OI were investigated.

methodsA comparative analysis was performed of the genotypes and phenotypes of 146 unrelated inherited and de novo collagen I OI cases from Estonia, Ukraine, and Vietnam. Mutational analysis of the subjects and all available parents were performed with Sanger sequencing.

resultsResults showed that 56.16% of the OI cases were caused by de novo pathogenic variants. The proportion of OI types OI1, OI4, and OI3 among subjects with inherited OI was 45.31%, 46.88%, and 7.81%, respectively. Among subjects with de novo OI, the proportions of OI types (OI1, OI4, and OI3) were almost equal. Both inherited and de novo OI pathogenic variants occurred more often in the COL1A1 gene than in the COL1A2. The majority of de novo cases were missense pathogenic variants, whereas inherited OI was mostly caused by loss of function pathogenic variants.

conclusionIn summary, there were significant differences between the phenotypes and genotypes of subjects with de novo and inherited OI. These findings may promote the further understanding of OI etiology, and assist with diagnostics procedures, as well as with family planning.

Indexed as

MutationAdolescentCollagen Type ICollagen Type I, alpha 1 ChainFemaleHumansMaleOsteogenesis ImperfectaCOL1A2 protein, humanCollagen Type ICollagen Type I, alpha 1 Chainbone fragilitycollagende novoosteogenesis imperfectaSanger sequencing

Identifiers

PMID30675999
PMCPMC6418448
OpenAlexW2911690599

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.