Evidence map›Paper›PMID 30674924›Full record

ArticleScientific reports2019

Genome-wide transcriptome analysis to further understand neutrophil activation and lncRNA transcript profiles in Kawasaki disease.

Tai-Ming Ko, Jeng-Sheng Chang, Shih-Ping Chen, Yi-Min Liu, Chia-Jung Chang, Fuu-Jen Tsai, Yi-Ching Lee, Chien-Hsiun Chen, Yuan-Tsong Chen, Jer-Yuarn Wu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
  6. Article
  7. Use of Host Response to Refine the Diagnosis of Group A Streptococcal Pharyngitis.Journal of the Pediatric Infectious Diseases Society · 2022
    Article
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  17. Article
  18. Epigenetics in Kawasaki Disease.Frontiers in pediatrics · 2021
    Review
  19. Frontiers in genetics · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Tai-Ming KoInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Jeng-Sheng ChangDepartment of Pediatrics, China Medical University Hospital, Taichung, Taiwan.
Shih-Ping ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Yi-Min LiuInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Chia-Jung ChangInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Fuu-Jen TsaiSchool of Chinese Medicine, China Medical University, Taichung, Taiwan.
Yi-Ching LeeInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Chien-Hsiun ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Yuan-Tsong ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Jer-Yuarn WuInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan. jywu@ibms.sinica.edu.tw.
Institute of Biomedical Sciences, Academia Sinica · TWChina Medical University · TWChina Medical University Hospital · TWDuke Medical Center · USInstitute of Cellular and Organismic Biology, Academia Sinica · TWNational Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kawasaki disease (KD) is the most common cause of acquired cardiac disease in children in developed countries. However, little is known regarding the role of transcriptomic targets of KD in the disease progression and development of complications, especially coronary artery aneurysms (CAA). The aim of our study was to identify transcripts affected by KD and their potential role in the disease. We enrolled 37 KD patients and collected blood samples along a comprehensive time-course. mRNA profiling demonstrated an abundance of CD177 transcript in acute KD, and in the intravenous immunoglobulin (IVIG)-resistant group compared to in the IVIG-sensitive group. lncRNA profiling identified XLOC_006277 as the most highly expressed molecule. XLOC_006277 expression in patients at acute stage was 3.3-fold higher relative to patients with convalescent KD. Moreover, XLOC_006277 abundance increased significantly in patients with CAA. XLOC_006277 knockdown suppressed MMP-8 and MMP-9 expression, both associated with heart lesions. Our result suggested that the increase of CD177

Indexed as

Gene Expression ProfilingNeutrophil ActivationCoronary AneurysmFemaleGenome, HumanGPI-Linked ProteinsHumansInfantIsoantigensMaleMucocutaneous Lymph Node SyndromeReceptors, Cell SurfaceRNA, Long NoncodingCD177 protein, humanGPI-Linked ProteinsIsoantigensReceptors, Cell SurfaceRNA, Long Noncoding

Identifiers

PMID30674924
PMCPMC6344526
OpenAlexW2911742061

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.