Evidence map›Paper›PMID 30673782›Full record

ArticlePLoS pathogens2019

Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium.

Harald Oey, Martha Zakrzewski, Kerstin Gravermann, Neil D Young, Pasi K Korhonen, Geoffrey N Gobert, Sujeevi Nawaratna, Shihab Hasan, David M Martínez, Hong You and 11 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
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  13. Trematode Genomics and Proteomics.Advances in experimental medicine and biology · 2024
    Article
  14. Article
  15. Review
  16. Geographical Influence on Morphometric Variability of Genetically "Pure"Tropical medicine and infectious disease · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 4 countries.

Harald OeyThe University of Queensland Diamantina Institute, The University of Queensland, Brisbane, QLD, Australia.
Martha ZakrzewskiGenetics & Computational Biology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
Kerstin GravermannFaculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany.
Neil D YoungFaculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, Australia.ORCID 0000-0001-8756-229X
Pasi K KorhonenFaculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, Australia.ORCID 0000-0002-9957-4674
Geoffrey N GobertImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.ORCID 0000-0001-5884-6453
Sujeevi NawaratnaImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.ORCID 0000-0001-8716-2296
Shihab HasanThe University of Queensland Diamantina Institute, The University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0001-7789-2842
David M MartínezImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
Hong YouImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
Martin LavinUQ Centre for Clinical Research, The University of Queensland, Brisbane, QLD, Australia.
Malcolm K JonesImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.ORCID 0000-0002-0035-6141
Mark A RaganInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0003-1672-7020
Jens StoyeFaculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany.ORCID 0000-0002-4656-7155
Ana OleagaInstitute of Natural Resources and Agrobiology (IRNASA, CSIC), Cordel de Merinas, Salamanca, Spain.
Aidan M EmeryNatural History Museum, Life Sciences Department, Parasites and Vectors Division, Cromwell Road, London, United Kingdom.ORCID 0000-0001-9028-8586
Bonnie L WebsterNatural History Museum, Life Sciences Department, Parasites and Vectors Division, Cromwell Road, London, United Kingdom.
David RollinsonNatural History Museum, Life Sciences Department, Parasites and Vectors Division, Cromwell Road, London, United Kingdom.ORCID 0000-0003-1999-1716
Robin B GasserFaculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, Australia.ORCID 0000-0002-4423-1690
Donald P McManusImmunology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
Lutz KrauseThe University of Queensland Diamantina Institute, The University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0003-3806-0845
The University of Queensland · AUQIMR Berghofer Medical Research Institute · AUNatural History Museum · GBThe University of Melbourne · AUBielefeld University · DEInstituto de Recursos Naturales y Agrobiología de Salamanca · ESQueen's University Belfast · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesenteric infection by the parasitic blood fluke Schistosoma bovis is a common veterinary problem in Africa and the Middle East and occasionally in the Mediterranean Region. The species also has the ability to form interspecific hybrids with the human parasite S. haematobium with natural hybridisation observed in West Africa, presenting possible zoonotic transmission. Additionally, this exchange of alleles between species may dramatically influence disease dynamics and parasite evolution. We have generated a 374 Mb assembly of the S. bovis genome using Illumina and PacBio-based technologies. Despite infecting different hosts and organs, the genome sequences of S. bovis and S. haematobium appeared strikingly similar with 97% sequence identity. The two species share 98% of protein-coding genes, with an average sequence identity of 97.3% at the amino acid level. Genome comparison identified large continuous parts of the genome (up to several 100 kb) showing almost 100% sequence identity between S. bovis and S. haematobium. It is unlikely that this is a result of genome conservation and provides further evidence of natural interspecific hybridization between S. bovis and S. haematobium. Our results suggest that foreign DNA obtained by interspecific hybridization was maintained in the population through multiple meiosis cycles and that hybrids were sexually reproductive, producing viable offspring. The S. bovis genome assembly forms a highly valuable resource for studying schistosome evolution and exploring genetic regions that are associated with species-specific phenotypic traits.

Indexed as

AfricaAfrica, WesternAnimalsBase SequenceCattleChromosome MappingDNAGenomeGenome, MitochondrialHybridization, GeneticMiddle EastPhylogenyProteomeSchistosomaSpecies SpecificityTrematodaDNAProteome

Identifiers

PMID30673782
PMCPMC6361461
OpenAlexW2913434624

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.