Evidence map›Paper›PMID 30672911›Full record

ArticleChemical communications (Cambridge, England)2019

Sterol A-ring plasticity in hedgehog protein cholesterolysis supports a primitive substrate selectivity mechanism.

Daniel A Ciulla, Andrew G Wagner, Xinyue Liu, Courtney L Cooper, Michael T Jorgensen, Chunyu Wang, Puja Goyal, Nilesh K Banavali, John L Pezzullo, José-Luis Giner and 1 more

Abstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Enzymatic Beacons for Specific Sensing of Dilute Nucleic Acid.Chembiochem : a European journal of chemical biology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Daniel A CiullaChemistry Department, Binghamton University, Binghamton, New York 13902, USA. callahan@binghamton.edu.
Andrew G Wagner
Xinyue Liu
Courtney L Cooper
Michael T Jorgensen
Chunyu Wang
Puja Goyal
Nilesh K Banavali
John L Pezzullo
José-Luis Giner
Brian P Callahan
Binghamton University · USSUNY College of Environmental Science and Forestry · USRensselaer Polytechnic Institute · USNew York State Department of Health · US

Funding

Structural Mechanisms of Hedgehog Autoprocessing in Physiology and DiseaseR01CA206592 · NCI · RENSSELAER POLYTECHNIC INSTITUTE · PI CALLAHAN, BRIAN PATRICK, WANG, CHUNYU · 2017 to 2021
$2.0M
A 800 MHz Nuclear Magnetic Resonance Spectrometer in Support of Life Science ReseS10OD012254 · OD · UPSTATE MEDICAL UNIVERSITY · PI WILKENS, STEPHAN · 2013 to 2013
$2.0M
NCI NIH HHS R01 CA206592NIH HHS S10 OD012254
6 · The paper itself

Abstract

Cholesterolysis of Hedgehog family proteins couples endoproteolysis to protein C-terminal sterylation. The transformation is self-catalyzed by HhC, a partially characterized enzymatic domain found in precursor forms of Hedgehog. Here we explore spatial ambiguity in sterol recognition by HhC, using a trio of derivatives where the sterol A-ring is contracted, fused, or distorted. Sterylation assays indicate that these geometric variants react as substrates with relative activity: cholesterol, 1.000 > A-ring contracted, 0.100 > A-ring fused, 0.020 > A-ring distorted, 0.005. Experimental results and computational sterol docking into the first HhC homology model suggest a partially unstructured binding site with substrate recognition governed in large part by hydrophobic interactions.

Indexed as

Binding SitesCholesterolFluorescence Resonance Energy TransferHedgehog ProteinsHumansKineticsProtein Structure, TertiarySterolsSubstrate SpecificityCholesterolHedgehog ProteinsSterols

Identifiers

PMID30672911
PMCPMC6365966
OpenAlexW2912208833

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.