Evidence map›Paper›PMID 30671704›Full record

ArticleFunctional & integrative genomics2019

Leaf rust (Puccinia triticina) mediated RNAi in wheat (Triticum aestivum L.) prompting host susceptibility.

Summi Dutta, Shailendra Kumar Jha, Kumble Vinod Prabhu, Manish Kumar, Kunal Mukhopadhyay

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. RNA-Based Control of Fungal Pathogens in Plants.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Summi DuttaDepartment of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India.
Shailendra Kumar JhaDivision of Genetics, Indian Agricultural Research Institute, New Delhi, 110012, India.
Kumble Vinod PrabhuDivision of Genetics, Indian Agricultural Research Institute, New Delhi, 110012, India.
Manish KumarDepartment of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India.
Kunal MukhopadhyayDepartment of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India. kmukhopadhyay@bitmesra.ac.in.ORCID http://orcid.org/0000-0003-2213-8134
Birla Institute of Technology, Mesra · INIndian Agricultural Research Institute · IN

Funding

BTISNet SubDIC BT/BI/04/065/04Centre of Excellence, Technical Education Quality Improvement Program-II NPIU/TEQIP II/FIN/31/158Innovation in Science Pursuit for Inspired Research (INSPIRE), Government of India, Ministry of Science and Technology, New Delhi IF140725
6 · The paper itself

Abstract

Significance of microRNAs in regulating gene expression in higher eukaryotes as well as in pathogens like fungi to suppress host defense is a well-established phenomenon. The present study focuses on leaf rust fungi Puccinia triticina (Pathotype 77-5) mediated RNAi to make wheat (Triticum aestivum L.) more susceptible. To reach such conclusions, we first confirmed the presence of argonaute (AGO) and dicer-like protein (DCL) family sequences in Puccinia. Bioinformatic tools were applied to retrieve the sequences from Puccinia genome followed by cloning and sequencing from P. triticina pathotype 77-5 cDNA to obtain the specific sequences. Their homologs were searched in other 14 Puccinia races to relate them with pathogenesis. Further, precursor sequences for three miRNA-like RNA molecules (milRs) were cloned from P. triticina cDNA. Their target genes like MAP kinase were successfully predicted and validated through degradome mapping and qRT-PCR. Gradual increase in milR2 (milR and milR*) expression over progressive time point of infection and positive expression for all the milRs within 77-5 urediniospores confirmed a complete host- independent RNAi activity by P. triticina.

Indexed as

Gene SilencingArgonaute ProteinsBasidiomycotaExoribonucleasesFungal ProteinsHost-Pathogen InteractionsMicroRNAsPlant ImmunityPlant ProteinsTriticumArgonaute Proteinsexoribonuclease IIExoribonucleasesFungal ProteinsMicroRNAsPlant ProteinsArgonauteDicer-like proteinLeaf rustmiRNA-like RNA moleculesPuccinia triticina pathotype 77-5RNAiTriticum aestivum L.Wheat

Identifiers

PMID30671704
OpenAlexW2914881611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.