Evidence map›Paper›PMID 30670786›Full record

ArticleScientific reports2019

Targeting HIV-1 Protease Autoprocessing for High-throughput Drug Discovery and Drug Resistance Assessment.

Liangqun Huang, Linfeng Li, ChihFeng Tien, Daniel V LaBarbera, Chaoping Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Viral proteases as therapeutic targets.Molecular aspects of medicine · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Inhibition of HIV-1 Protease byEvidence-based complementary and alternative medicine : eCAM · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Liangqun HuangDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.
Linfeng LiDepartment of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
ChihFeng TienDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.
Daniel V LaBarberaDepartment of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Chaoping ChenDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA. Chaoping.Chen@colostate.edu.
Colorado State University · USUniversity of Montana · US

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
Assay Development for Identification of HIV-1 Protease Autoprocessing Specific InhibitorsR01AI120365 · NIAID · COLORADO STATE UNIVERSITY · PI CHEN, CHAOPING, LABARBERA, DANIEL V. · 2016 to 2018
$1.1M
Assay Optimization for Identification of Novel HIV-1 Protease Autoprocessing InhiR03AI108392 · NIAID · COLORADO STATE UNIVERSITY · PI CHEN, CHAOPING · 2014 to 2015
$149k
NCATS NIH HHS UL1 TR001082NIAID NIH HHS R01 AI120365NIAID NIH HHS R03 AI108392
6 · The paper itself

Abstract

HIV-1 protease autoprocessing liberates the free mature protease from its Gag-Pol polyprotein precursor through a series of highly regulated autoproteolysis reactions. Herein, we report the development and validation (Z' ≥ 0.50) of a cell-based functional assay for high-throughput screening (HTS) of autoprocessing inhibitors using fusion precursors in combination with AlphaLISA (amplified luminescent proximity homogeneous assay ELISA). Through pilot screening of a collection of 130 known protease inhibitors, the AlphaLISA assay confirmed all 11 HIV protease inhibitors in the library capable of suppressing precursor autoprocessing at low micromolar concentrations. Meanwhile, other protease inhibitors had no impact on precursor autoprocessing. We next conducted HTS of ~23,000 compounds but found no positive hits. Such high selectivity is advantageous for large-scale HTS campaigns and as anticipated based on assay design because a positive hit needs simultaneously to be nontoxic, cell permeable, and inhibiting precursor autoprocessing. Furthermore, AlphaLISA quantification of fusion precursors carrying mutations known to cause resistance to HIV protease inhibitors faithfully recapitulated the reported resistance, suggesting that precursor autoprocessing is a critical step contributing to drug resistance. Taken together, this reported AlphaLISA platform will provide a useful tool for drug discovery targeting HIV-1 protease autoprocessing and for quantification of PI resistance.

Indexed as

Drug DiscoveryDrug ResistanceEnzyme-Linked Immunosorbent AssayHigh-Throughput Screening AssaysHIV ProteaseHIV Protease InhibitorsHumansProtein Processing, Post-TranslationalProteolysisHIV ProteaseHIV Protease Inhibitorsp16 protease, Human immunodeficiency virus 1

Identifiers

PMID30670786
PMCPMC6343032
OpenAlexW2914954038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.