Evidence map›Paper›PMID 30670720›Full record

ArticleScientific reports2019

Multi-locus DNA metabarcoding of zooplankton communities and scat reveal trophic interactions of a generalist predator.

E L Carroll, R Gallego, M A Sewell, J Zeldis, L Ranjard, H A Ross, L K Tooman, R O'Rorke, R D Newcomb, R Constantine

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Multi-predator feeding aggregations: understanding dynamic communities through functional niches and demographic analysis tools.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The crossover from microscopy to genes in marine diversity: from species to assemblages in marine pelagic copepods.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

E L CarrollSchool of Biological Sciences, University of Auckland, Auckland, New Zealand. e.carroll@auckland.ac.nz.ORCID 0000-0003-2210-9106
R GallegoSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.ORCID 0000-0003-4990-9648
M A SewellSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
J ZeldisNational Institute of Water and Atmospheric Research, Christchurch, New Zealand.
L RanjardResearch School of Biology, the Australian National University, Canberra, ACT, Australia.ORCID 0000-0002-7622-4823
H A RossSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
L K ToomanThe Institute for Plant & Food Research, Auckland, New Zealand.
R O'RorkeSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
R D NewcombSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
R ConstantineSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand the ecosystem dynamics that underpin the year-round presence of a large generalist consumer, the Bryde's whale (Balaenoptera edeni brydei), we use a DNA metabarcoding approach and systematic zooplankton surveys to investigate seasonal and regional changes in zooplankton communities and if whale diet reflects such changes. Twenty-four zooplankton community samples were collected from three regions throughout the Hauraki Gulf, New Zealand, over two temperature regimes (warm and cool seasons), as well as 20 samples of opportunistically collected Bryde's whale scat. Multi-locus DNA barcode libraries were constructed from 18S and COI gene fragments, representing a trade-off between identification and resolution of metazoan taxa. Zooplankton community OTU occurrence and relative read abundance showed regional and seasonal differences based on permutational analyses of variance in both DNA barcodes, with significant changes in biodiversity indices linked to season in COI only. In contrast, we did not find evidence that Bryde's whale diet shows seasonal or regional trends, but instead indicated clear prey preferences for krill-like crustaceans, copepods, salps and ray-finned fishes independent of prey availability. The year-round presence of Bryde's whales in the Hauraki Gulf is likely associated with the patterns of distribution and abundance of these key prey items.

Indexed as

DietFood ChainAnimalsBalaenopteraDNA Barcoding, TaxonomicEcosystemNew ZealandSeasonsZooplankton

Identifiers

PMID30670720
PMCPMC6342929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.