Evidence map›Paper›PMID 30669306›Full record

ArticleDiagnostics (Basel, Switzerland)2019

Cost-Efficient and Easy to Perform PCR-Based Assay to Identify Met Exon 14 Skipping in Formalin-Fixed Paraffin-Embedded (FFPE) Non-Small Cell Lung Cancer (NSCLC) Samples.

Odharnaith O'Brien, Mark C Wright, Cathal O'Brien, Orla Geoghegan, Niamh Leonard, Siobhan Nicholson, Sinéad Cuffe, Aurelie Fabre, Wolfram Jochum, Markus Joerger and 2 more

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Trial
  2. Review
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  6. Journal of personalized medicine · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Odharnaith O'BrienThoracic Oncology Research Group, Trinity Translational Medicine Institute, St. James's Hospital, D08 W9RT Dublin, Ireland. odharnaithobrien@gmail.com.
Mark C WrightDepartment of Histopathology, Labmed Directorate, St. James's Hospital, D08 RX0X Dublin, Ireland. mwright@stjames.ie.
Cathal O'BrienCancer Molecular Diagnostics, Labmed Directorate, St. James's Hospital, D08 RX0X Dublin, Ireland. OBRIEC12@tcd.ie.
Orla GeogheganThoracic Oncology Research Group, Trinity Translational Medicine Institute, St. James's Hospital, D08 W9RT Dublin, Ireland. geoghego@tcd.ie.ORCID 0000-0002-5490-1707
Niamh LeonardDepartment of Histopathology, Labmed Directorate, St. James's Hospital, D08 RX0X Dublin, Ireland. nleonard@stjames.ie.
Siobhan NicholsonDepartment of Histopathology, Labmed Directorate, St. James's Hospital, D08 RX0X Dublin, Ireland. snicholson@stjames.ie.
Sinéad CuffeThoracic Oncology Research Group, Trinity Translational Medicine Institute, St. James's Hospital, D08 W9RT Dublin, Ireland. scuffe@stjames.ie.
Aurelie FabreDepartment of Pathology, St. Vincent's University Hospital, University College Dublin School of Medicine, D04 T6F4 Dublin, Ireland. afabre@svuh.ie.ORCID 0000-0001-8176-1386
Wolfram JochumDepartment of Pathology, Cantonal Hospital, 9007 St. Gallen, Switzerland. wolfram.jochum@kssg.ch.
Markus JoergerDepartment of Medical Oncology & Hematology, Cantonal Hospital, 9007 St. Gallen, Switzerland. Markus.Joerger@kssg.ch.ORCID 0000-0001-6602-6287
Steven G GrayThoracic Oncology Research Group, Trinity Translational Medicine Institute, St. James's Hospital, D08 W9RT Dublin, Ireland. sgray@stjames.ie.ORCID 0000-0002-5850-6392
Stephen P FinnThoracic Oncology Research Group, Trinity Translational Medicine Institute, St. James's Hospital, D08 W9RT Dublin, Ireland. Stephen.Finn@tcd.ie.ORCID 0000-0002-8628-5814
St. James's Hospital · IEKantonsspital St. Gallen · CHTrinity College Dublin · IEUniversity College Dublin · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MET is a receptor tyrosine kinase (RTK) that plays important roles in carcinogenesis. Despite being frequently overexpressed in cancer, clinical responses to targeting this receptor have been limited. Recently novel splicing mutations involving the loss of exon 14 (called METex14 skipping) have emerged as potential biomarkers to predict for responsiveness to targeted therapies with Met inhibitors in non-small cell lung cancer (NSCLC). Currently, the diverse genomic alterations responsible for METex14 skipping pose a challenge for routine clinical diagnostic testing. In this report, we examine three different methodologies to detect METex14 and assess their potential utility for use as a diagnostic assay for both the identification of METex14 and intra-tumoural distribution in NSCLC.

Indexed as

diagnostic assayMet exon 14 skippingnext generation sequencingPCRRNA hybridisation

Identifiers

PMID30669306
PMCPMC6468531
OpenAlexW2910253917

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.