Evidence map›Paper›PMID 30668691›Full record

ArticleGenome biology and evolution2019

Contrasting Patterns of Rapid Molecular Evolution within the p53 Network across Mammal and Sauropsid Lineages.

Courtney N Passow, Anne M Bronikowski, Heath Blackmon, Shikha Parsai, Tonia S Schwartz, Suzanne E McGaugh

Abstract readComparative Study
In one paragraph

Article in Genome biology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. The Fourth Annual Symposium of the Midwest Aging Consortium.The journals of gerontology. Series A, Biological sciences and medical sciences · 2024
    Article
  4. NAR cancer · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Courtney N PassowDepartment of Ecology, Evolution, and Behavior, University of Minnesota.
Anne M BronikowskiDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University.
Heath BlackmonDepartment of Ecology, Evolution, and Behavior, University of Minnesota.
Shikha ParsaiDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University.
Tonia S SchwartzDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University.
Suzanne E McGaughDepartment of Ecology, Evolution, and Behavior, University of Minnesota.

Funding

Biodemography and senescence in long-lived painted turtlesR01AG049416 · NIA · IOWA STATE UNIVERSITY · PI BRONIKOWSKI, ANNE · 2015 to 2019
$1.1M
NIA NIH HHS R01 AG049416
6 · The paper itself

Abstract

Cancer is a threat to multicellular organisms, yet the molecular evolution of pathways that prevent the accumulation of genetic damage has been largely unexplored. The p53 network regulates how cells respond to DNA-damaging stressors. We know little about p53 network molecular evolution as a whole. In this study, we performed comparative genetic analyses of the p53 network to quantify the number of genes within the network that are rapidly evolving and constrained, and the association between lifespan and the patterns of evolution. Based on our previous published data set, we used genomes and transcriptomes of 34 sauropsids and 32 mammals to analyze the molecular evolution of 45 genes within the p53 network. We found that genes in the network exhibited evidence of positive selection and divergent molecular evolution in mammals and sauropsids. Specifically, we found more evidence of positive selection in sauropsids than mammals, indicating that sauropsids have different targets of selection. In sauropsids, more genes upstream in the network exhibited positive selection, and this observation is driven by positive selection in squamates, which is consistent with previous work showing rapid divergence and adaptation of metabolic and stress pathways in this group. Finally, we identified a negative correlation between maximum lifespan and the number of genes with evidence of divergent molecular evolution, indicating that species with longer lifespans likely experienced less variation in selection across the network. In summary, our study offers evidence that comparative genomic approaches can provide insights into how molecular networks have evolved across diverse species.

Indexed as

Evolution, MolecularGenes, p53Selection, GeneticAnimalsPhylogenyVertebratesdivergent molecular evolutionlifespanmammalsp53-signaling networkpositive selectionsauropsids

Identifiers

PMID30668691
PMCPMC6406535

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.