Evidence map›Paper›PMID 30668586›Full record

ArticlePLoS pathogens2019

Inhibition of the Staphylococcus aureus c-di-AMP cyclase DacA by direct interaction with the phosphoglucosamine mutase GlmM.

Tommaso Tosi, Fumiya Hoshiga, Charlotte Millership, Rahul Singh, Charles Eldrid, Delphine Patin, Dominique Mengin-Lecreulx, Konstantinos Thalassinos, Paul Freemont, Angelika Gründling

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
  2. TheInfection and immunity · 2026
    Article
  3. Article
  4. Staying in the loop to make ends meet: roles and regulation of GlmR inbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Genome-wide analysis ofJournal of bacteriology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Bacterial cell volume regulation and the importance of cyclic di-AMP.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. C-di-AMP Is a Second Messenger inMicroorganisms · 2023
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Tommaso TosiSection of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, United Kingdom.ORCID 0000-0002-4564-7807
Fumiya HoshigaSection of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, United Kingdom.
Charlotte MillershipSection of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, United Kingdom.
Rahul SinghSection of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, United Kingdom.ORCID 0000-0001-8397-0202
Charles EldridInstitute of Structural and Molecular Biology, Birkbeck College, University of London, Malet Street, London, United Kingdom.ORCID 0000-0001-5306-3644
Delphine PatinInstitute for Integrative Biology of the Cell, CEA, CNRS, Univ Paris-Sud and Université Paris-Saclay, Gif-sur-Yvette, France.ORCID 0000-0002-0771-2794
Dominique Mengin-LecreulxInstitute for Integrative Biology of the Cell, CEA, CNRS, Univ Paris-Sud and Université Paris-Saclay, Gif-sur-Yvette, France.ORCID 0000-0003-3205-0275
Konstantinos ThalassinosInstitute of Structural and Molecular Biology, Birkbeck College, University of London, Malet Street, London, United Kingdom.ORCID 0000-0001-5072-8428
Paul FreemontSection of Structural Biology, Department of Medicine, Imperial College London, London, United Kingdom.
Angelika GründlingSection of Microbiology and MRC Centre for Molecular Bacteriology and Infection, Imperial College London, London, United Kingdom.ORCID 0000-0002-6235-8687
Imperial College London · GBCentre National de la Recherche Scientifique · FRInstitute of Structural and Molecular Biology · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L015382/1Medical Research Council MR/P011071/1Medical Research Council MR/P028225/1Wellcome TrustWellcome Trust 100289Wellcome Trust 104913/Z/14/Z
6 · The paper itself

Abstract

c-di-AMP is an important second messenger molecule that plays a pivotal role in regulating fundamental cellular processes, including osmotic and cell wall homeostasis in many Gram-positive organisms. In the opportunistic human pathogen Staphylococcus aureus, c-di-AMP is produced by the membrane-anchored DacA enzyme. Inactivation of this enzyme leads to a growth arrest under standard laboratory growth conditions and a re-sensitization of methicillin-resistant S. aureus (MRSA) strains to ß-lactam antibiotics. The gene coding for DacA is part of the conserved three-gene dacA/ybbR/glmM operon that also encodes the proposed DacA regulator YbbR and the essential phosphoglucosamine mutase GlmM, which is required for the production of glucosamine-1-phosphate, an early intermediate of peptidoglycan synthesis. These three proteins are thought to form a complex in vivo and, in this manner, help to fine-tune the cellular c-di-AMP levels. To further characterize this important regulatory complex, we conducted a comprehensive structural and functional analysis of the S. aureus DacA and GlmM enzymes by determining the structures of the S. aureus GlmM enzyme and the catalytic domain of DacA. Both proteins were found to be dimers in solution as well as in the crystal structures. Further site-directed mutagenesis, structural and enzymatic studies showed that multiple DacA dimers need to interact for enzymatic activity. We also show that DacA and GlmM form a stable complex in vitro and that S. aureus GlmM, but not Escherichia coli or Pseudomonas aeruginosa GlmM, acts as a strong inhibitor of DacA function without the requirement of any additional cellular factor. Based on Small Angle X-ray Scattering (SAXS) data, a model of the complex revealed that GlmM likely inhibits DacA by masking the active site of the cyclase and preventing higher oligomer formation. Together these results provide an important mechanistic insight into how c-di-AMP production can be regulated in the cell.

Indexed as

Adenylyl Cyclase InhibitorsAdenylyl CyclasesBacterial ProteinsCell WallDinucleoside PhosphatesMethicillin-Resistant Staphylococcus aureusOperonPhosphoglucomutasePhosphorus-Oxygen LyasesProtein DomainsScattering, Small AngleSecond Messenger SystemsStaphylococcal InfectionsStaphylococcus aureusX-Ray DiffractionAdenylyl Cyclase InhibitorsAdenylyl CyclasesBacterial Proteinscyclic diadenosine phosphateDinucleoside PhosphatesPhosphoglucomutasephosphoglucosamine mutasePhosphorus-Oxygen Lyases

Identifiers

PMID30668586
PMCPMC6368335
OpenAlexW2912371761

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.