Evidence map›Paper›PMID 30666854›Full record

ArticleJournal of biomedical optics2019

Tissue spatial correlation as cancer marker.

Masanori Takabayashi, Hassaan Majeed, Andre Kajdacsy-Balla, Gabriel Popescu

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Masanori TakabayashiKyushu Institute of Technology, Department of Systems Design and Informatics, Iizuka, Fukuoka, Japan.
Hassaan MajeedUniversity of Illinois at Urbana-Champaign, Beckman Institute of Advanced Science and Technology, De, United States.
Andre Kajdacsy-BallaUniversity of Illinois at Chicago, Department of Pathology, Chicago, Illinois, United States.
Gabriel PopescuUniversity of Illinois at Urbana-Champaign, Beckman Institute of Advanced Science and Technology, De, United States.
University of Illinois Urbana-Champaign · USKyushu Institute of Technology · JPUniversity of Illinois Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We propose an intrinsic cancer marker in fixed tissue biopsy slides, which is based on the local spatial autocorrelation length obtained from quantitative phase images. The spatial autocorrelation length in a small region of the tissue phase image is sensitive to the nanoscale cellular morphological alterations and can hence inform on carcinogenesis. Therefore, this metric can potentially be used as an intrinsic cancer marker in histopathology. Typically, these correlation length maps are calculated by computing two-dimensional Fourier transforms over image subregions-requiring long computational times. We propose a more time-efficient method of computing the correlation map and demonstrate its value for diagnosis of benign and malignant breast tissues. Our methodology is based on highly sensitive quantitative phase imaging data obtained by spatial light interference microscopy.

Indexed as

AlgorithmsBiomarkers, TumorBiopsyBreastBreast NeoplasmsCarcinogenesisDiagnosis, Computer-AssistedFemaleFourier AnalysisHumansImage Interpretation, Computer-AssistedMicroscopy, InterferenceModels, StatisticalRefractometryReproducibility of ResultsTissue Array AnalysisBiomarkers, Tumorbiopsy slide diagnosisbreast cancerquantitative phase imaging

Identifiers

PMID30666854
PMCPMC6985696
OpenAlexW2953276466

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.