Evidence map›Paper›PMID 30666517›Full record

SynthesisPathology oncology research : POR2020

An Association and Meta-Analysis of Esophageal Squamous Cell Carcinoma Risk Associated with PLCE1 rs2274223, C20orf54 rs13042395 and RUNX1 rs2014300 Polymorphisms.

Ziba Nariman-Saleh-Fam, Zahra Saadatian, Lida Nariman-Saleh-Fam, Elaheh Ouladsahebmadarek, Javad Tavakkoly-Bazzaz, Milad Bastami

Abstract readMeta-Analysis
PubMed Publisher
In one paragraph

Synthesis in Pathology oncology research : POR, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Carcinoma of Esophagus.Journal of gastroenterology and hepatology · 2025
    Review
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ziba Nariman-Saleh-FamWomen's Reproductive Health Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
Zahra SaadatianStudent Research Committee, Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Lida Nariman-Saleh-FamLiver and Gastrointestinal Diseases Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
Elaheh OuladsahebmadarekWomen's Reproductive Health Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
Javad Tavakkoly-BazzazMedical Genetics Department, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran. tavakkolybazzazj@tums.ac.ir.
Milad BastamiImmunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran. bastamim@tbzmed.ac.ir.ORCID http://orcid.org/0000-0002-7686-4505

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the highest risk of esophageal squamous cell carcinoma (ESCC) in the world has been reported in Iran, which is located in the Asian esophageal cancer belt. ESCC constitutes 90% of the esophageal cancer cases in Iran. Genome wide association studies (GWASs) in Chinese have identified a number of candidate variants, of which PLCE1rs2274223, C20orf54rs13042395 and RUNX1rs2014300 are studied in high risk populations including Chinese, Caucasians and Africans. However, results are inconsistent and it is unknown whether similar associations exist in Iranian population. We evaluated association of three GWAS identified variants with risk of ESCC in an Iranian cohort consisted of 200 ESCC patients and 300 healthy controls and conducted meta-analysis of ESCC risk associated with rs2274223 (involving 9810 cases and 13,128 controls) and rs13042395 (involving 2363 cases and 5329 controls). Logistic regression analysis showed that rs2274223 was associated with ESCC under codominant [GG/AA, 2.47(1.17-5.23), P:0.021], dominant [AG + GG/AA, 1.57(1.09-2.27), P:0.016], recessive [GG/AA+AG, 2.18(1.04-4.56), P:0.036] and log-additive models [1.51(1.12-2.02), P:0.006]. C20orf54 rs13042395 was not associated with ESCC under any genetic model. RUNX1 rs2014300 was associated with risk of ESCC assuming codominant [AG/GG, 0.63(0.41-0.97), P:0.018], dominant [AG + AA/GG, 0.59 (0.39-0.89), P:0.010] and log-additive models [0.61 (0.42-0.87), P: 0.005]. Meta-analysis found significant associations between rs2274223 and ESCC under all analyzed genetic models. However, meta-analysis stratified by ethnicity showed a significant association in Asians but not non-Asian populations. No significant association was found for rs13042395 in meta-analysis. This study provided first evidence for association of GWAS-identified variants with risk of ESCC in an Iranian cohort.

Indexed as

AdultAgedAged, 80 and overCore Binding Factor Alpha 2 SubunitEsophageal NeoplasmsEsophageal Squamous Cell CarcinomaFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansIranMaleMembrane Transport ProteinsMiddle AgedPhosphoinositide Phospholipase CPolymorphism, Single NucleotideCore Binding Factor Alpha 2 SubunitMembrane Transport ProteinsPhosphoinositide Phospholipase Cphospholipase C epsilonRUNX1 protein, humanSLC52A3 protein, humanAssociationEsophageal cancerGWASIranMeta-analysisPolymorphism

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.