Evidence map›Paper›PMID 30666368›Full record

ArticleMicrobial ecology2019

Taurine Is a Major Carbon and Energy Source for Marine Prokaryotes in the North Atlantic Ocean off the Iberian Peninsula.

Elisabeth L Clifford, Marta M Varela, Daniele De Corte, Antonio Bode, Victor Ortiz, Gerhard J Herndl, Eva Sintes

Open access · hybridAbstract read
In one paragraph

Article in Microbial ecology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 74 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 4 countries.

Elisabeth L CliffordDepartment of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Althanstrasse 14, 1090, Vienna, Austria.
Marta M VarelaInstituto Español de Oceanografía (IEO), Centro Oceanográfico de A Coruña, Apdo 130, 15080, A Coruña, Spain.
Daniele De CorteResearch and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Natushima 2-15, Yokosuka, Kanagawa, 237-0061, Japan.
Antonio BodeInstituto Español de Oceanografía (IEO), Centro Oceanográfico de A Coruña, Apdo 130, 15080, A Coruña, Spain.
Victor OrtizDepartment of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Althanstrasse 14, 1090, Vienna, Austria.
Gerhard J HerndlDepartment of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Althanstrasse 14, 1090, Vienna, Austria.
Eva SintesDepartment of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Althanstrasse 14, 1090, Vienna, Austria. eva.sintes@univie.ac.at.ORCID http://orcid.org/0000-0002-7408-5647
University of Vienna · ATInstituto Español de Oceanografía · ESJapan Agency for Marine-Earth Science and Technology · JP

Funding

Austrian Science Fund I486-B09Austrian Science Fund P27696-B22Austrian Science Fund Z194-B17Austrian Science Fund FWF I 486Austrian Science Fund FWF Z 194FP7 Ideas: European Research Council (FP7/2007-2013) 268595Ministerio de Econom?a y Competitividad CTM2011-24008Xunta de Galicia 10MMA604024PR, 2010-2012
6 · The paper itself

Abstract

Taurine, an amino acid-like compound, acts as an osmostress protectant in many marine metazoans and algae and is released via various processes into the oceanic dissolved organic matter pool. Taurine transporters are widespread among members of the marine prokaryotic community, tentatively indicating that taurine might be an important substrate for prokaryotes in the ocean. In this study, we determined prokaryotic taurine assimilation and respiration throughout the water column along two transects in the North Atlantic off the Iberian Peninsula. Taurine assimilation efficiency decreased from the epipelagic waters from 55 ± 14% to 27 ± 20% in the bathypelagic layers (means of both transects). Members of the ubiquitous alphaproteobacterial SAR11 clade accounted for a large fraction of cells taking up taurine, especially in surface waters. Archaea (Thaumarchaeota + Euryarchaeota) were also able to take up taurine in the upper water column, but to a lower extent than Bacteria. The contribution of taurine assimilation to the heterotrophic prokaryotic carbon biomass production ranged from 21% in the epipelagic layer to 16% in the bathypelagic layer. Hence, we conclude that dissolved free taurine is a significant carbon and energy source for prokaryotes throughout the oceanic water column being utilized with similar efficiencies as dissolved free amino acids.

Indexed as

Amino AcidsArchaeaAtlantic OceanBacteriaCarbonSeawaterTaurineAmino AcidsCarbonTaurineDissolved free taurineNorth AtlanticOpen oceanProkaryotic metabolismTurnover rates

Identifiers

PMID30666368
PMCPMC6647121
OpenAlexW2913087278

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.