Evidence map›Paper›PMID 30665342›Full record

ArticleBMC infectious diseases2019

Investigating the virulence genes and antibiotic susceptibility patterns of Vibrio cholerae O1 in environmental and clinical isolates in Accra, Ghana.

David Abana, Elizabeth Gyamfi, Magdalene Dogbe, Grace Opoku, David Opare, Gifty Boateng, Lydia Mosi

Abstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Article
  6. Review
  7. Article
  8. Review
  9. Genomic characterization ofFrontiers in microbiology · 2025
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  12. ToxigenicApplied and environmental microbiology · 2023
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  17. Molecular characterization ofIranian journal of microbiology · 2021
    Article
  18. MLST/MVLST Analysis and Antibiotic Resistance ofIranian journal of public health · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

David AbanaDepartment of Biochemistry, Cell and Molecular Biology, University of Ghana, Legon, Ghana.
Elizabeth GyamfiDepartment of Biochemistry, Cell and Molecular Biology, University of Ghana, Legon, Ghana.
Magdalene DogbeDepartment of Biochemistry, Cell and Molecular Biology, University of Ghana, Legon, Ghana.
Grace OpokuDepartment of Biochemistry, Cell and Molecular Biology, University of Ghana, Legon, Ghana.
David OparePublic Health Reference Laboratory, Korle-Bu, Accra, Ghana.
Gifty BoatengPublic Health Reference Laboratory, Korle-Bu, Accra, Ghana.
Lydia MosiDepartment of Biochemistry, Cell and Molecular Biology, University of Ghana, Legon, Ghana. lmosi@ug.edu.gh.ORCID http://orcid.org/0000-0002-7672-0181

Funding

World Bank Group ACE02-WACCBIP: AWANDARE
6 · The paper itself

Abstract

backgroundCholera has been endemic in Ghana since its detection in 1970. It has been shown that long-term survival of the bacteria may be attained in aquatic environments. Consequently, cholera outbreaks may be triggered predominantly in densely populated urban areas. We investigated clinical and environmental isolates of Vibrio cholerae O1 in Accra to determine their virulence genes, antibiotic susceptibility patterns and environmental factors maintaining their persistence in the environment.

methodsWater samples from various sources were analyzed for the presence of V. cholerae O1 using culture methods. Forty clinical isolates from a previous cholera outbreak were included in the study for comparison. Antibiotic susceptibility patterns of the bacteria were determined by disc diffusion. Virulence genes were identified by analyzing genes for ctx, tcpA (tcpA

resultsEleven V. cholerae O1 strains were successfully isolated from streams, storage tanks and wells during the study period. All isolates were resistant to one or more of the eight antibiotics used. Multidrug resistance was observed in over 97% of the isolates. All isolates had genes for at least one virulence factor. Vibrio cholerae toxin gene was detected in 82.4% of the isolates. Approximately 81.8% of the isolates were positive for tcpA

conclusionsMultidrug resistant V. cholerae O1 with different genotypes and pathogenicity are present in water sources and co-exist with non O1/O139 in the study area.

Indexed as

Anti-Bacterial AgentsCholeraCholera ToxinDrug Resistance, Multiple, BacterialFimbriae ProteinsFresh WaterGenotypeGhanaHumansMicrobial Sensitivity TestsPolymerase Chain ReactionRiversVibrio cholerae O1VirulenceVirulence FactorsWater WellsAnti-Bacterial AgentsCholera ToxinFimbriae ProteinsTcpA protein, Vibrio choleraeVirulence FactorsAccraCholeraEnvironmental factorsGenotypesMultidrug resistanceVibrio cholerae O1Virulence genes

Identifiers

PMID30665342
PMCPMC6341726

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.