Evidence map›Paper›PMID 30665206›Full record

ReviewPhysical biology2019

Investigating epithelial-to-mesenchymal transition with integrated computational and experimental approaches.

Jianhua Xing, Xiao-Jun Tian

Open access · greenAbstract readReview
In one paragraph

Review in Physical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
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  8. Review
  9. Frontiers in cell and developmental biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Jianhua XingDepartment of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, 15261, United States of America.ORCID 0000-0002-3700-8765
Xiao-Jun TianSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, United States of America.ORCID 0000-0002-5601-2057
Arizona State University · USUniversity of Pittsburgh · US

Funding

Three-dimensional organoid models to study breast cancer progressionR37CA232209 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SANT, SHILPA · 2018 to 2024
$3.0M
Role of the Snail1-Twist-p21 axis on cell cycle arrest and renal fibrosis developmentR01DK119232 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI XING, JIANHUA · 2019 to 2022
$1.4M
Histopathologic validation of 89Zr-DFO-HuMab-5B1 PET/CT imaging in CA 19-9 positive pancreatic cancerR01CA222049 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI D'ANGELICA, MICHAEL I, LEWIS, JASON S. · 2018 to 2019
$791k
NCI NIH HHS R01 CA222049NCI NIH HHS R37 CA232209NIDDK NIH HHS R01 DK119232
6 · The paper itself

Abstract

The transition between epithelial and mesenchymal (EMT) is a fundamental cellular process that plays critical roles in development, cancer metastasis, and tissue wound healing. EMT is not a binary process but involves multiple partial EMT states that give rise to a high degree of cell state plasticity. Here, we first reviewed several studies on theoretical predictions and experimental verification of these intermediate states, the role of partial EMT on kidney fibrosis development, and how quantitative signaling information controls cell commitment to partial or full EMT upon transient signals. Next, we summarized existing knowledge and open questions on the coupling between EMT and other biological processes, such as the cell cycle, epigenetic regulation, stemness, and apoptosis. Taken together, EMT is a model system that has attracted increasing interests for quantitative experimental and theoretical studies.

Indexed as

AnimalsComputational BiologyEpithelial-Mesenchymal TransitionFibrosisHumansKidneyMiceNonlinear DynamicsRatsSignal Transduction

Identifiers

PMID30665206
PMCPMC6609444
OpenAlexW2910580329

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.