Evidence map›Paper›PMID 30665138›Full record

Trial reportComputers in biology and medicine2019

Automated diagnosis of HIV-associated neurocognitive disorders using large-scale Granger causality analysis of resting-state functional MRI.

Udaysankar Chockanathan, Adora M DSouza, Anas Z Abidin, Giovanni Schifitto, Axel Wismüller

Abstract readClinical Trial
In one paragraph

Trial report in Computers in biology and medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
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  14. COVID-19 in the Age of Artificial Intelligence: A Comprehensive Review.Interdisciplinary sciences, computational life sciences · 2021
    Review
  15. Article
  16. Synergistic effects of HIV and marijuana use on functional brain network organization.Progress in neuro-psychopharmacology & biological psychiatry · 2021
    Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Udaysankar ChockanathanDepartment of Neuroscience, University of Rochester Medical Center, 601 Elmwood Ave, Rochester, NY, 14642, USA. Electronic address: udaysankar_chockanathan@urmc.rochester.edu.
Adora M DSouzaDepartment of Electrical and Computer Engineering, University of Rochester, 500 Joseph C. Wilson Blvd, Rochester, NY, 14627, USA.
Anas Z AbidinDepartment of Biomedical Engineering, University of Rochester, 500 Joseph C. Wilson Blvd, Rochester, NY, 14627, USA.
Giovanni SchifittoDepartment of Neurology, University of Rochester Medical Center, 601 Elmwood Ave, Rochester, NY, 14642, USA.
Axel WismüllerDepartment of Neuroscience, University of Rochester Medical Center, 601 Elmwood Ave, Rochester, NY, 14642, USA; Department of Electrical and Computer Engineering, University of Rochester, 500 Joseph C. Wilson Blvd, Rochester, NY, 14627, USA; Department of Biomedical Engineering, University of Rochester, 500 Joseph C. Wilson Blvd, Rochester, NY, 14627, USA; Department of Imaging Sciences, University of Rochester Medical Center, 601 Elmwood Ave, Rochester, NY, 14642, USA.
University of Rochester · USUniversity of Rochester Medical Center · US

Funding

University of Rochester Mentoring Environment: Nurturing Training Opportunities in Research (UR-MENTOR)T32GM007356 · NIGMS · UNIVERSITY OF ROCHESTER · PI O'BANION, M. KERRY · 1985 to 2023
$15.1M
Chronic Exposure to cART Predispose Older HIV Infected Individuals to CNS Injury?R01MH099921 · NIMH · UNIVERSITY OF ROCHESTER · PI SCHIFITTO, GIOVANNI · 2013 to 2017
$3.0M
CRCNS: Large Scale Brain Connectivity in HIV-Related Cognitive ImpairmentR01DA034977 · NIDA · UNIVERSITY OF ROCHESTER · PI WISMUELLER, AXEL W.E. · 2012 to 2014
$599k
NIDA NIH HHS R01 DA034977NIGMS NIH HHS T32 GM007356NIMH NIH HHS R01 MH099921
6 · The paper itself

Abstract

HIV-associated neurocognitive disorders (HAND) represent an important source of neurologic complications in individuals with HIV. The dynamic, often subclinical, course of HAND has rendered diagnosis, which currently depends on neuropsychometric (NP) evaluation, a challenge for clinicians. Here, we present evidence that functional brain connectivity, derived by large-scale Granger causality (lsGC) analysis of resting-state functional MRI (rs-fMRI) time-series, represents a potential biomarker to address this critical diagnostic need. Brain graph properties were used as features in machine learning tasks to 1) classify individuals as HIV

Indexed as

Diagnosis, Computer-AssistedMagnetic Resonance ImagingSupport Vector MachineAdultBrainFemaleHIV InfectionsHumansMaleMiddle AgedNeurocognitive DisordersAutomated diagnosisfunctional connectivityGraph theoryHIV-Associated neurocognitive disorders (HAND)Large-scale Granger causalityResting-state fMRISupport vector machine

Identifiers

PMID30665138
PMCPMC6377830
OpenAlexW2910357997

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.