Evidence map›Paper›PMID 30664621›Full record

ArticleTranslational psychiatry2019

Cell type-specific gene expression patterns associated with posttraumatic stress disorder in World Trade Center responders.

Pei-Fen Kuan, Xiaohua Yang, Sean Clouston, Xu Ren, Roman Kotov, Monika Waszczuk, Prashant K Singh, Sean T Glenn, Eduardo Cortes Gomez, Jianmin Wang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 138 citations in OpenAlex.

  1. Pooled it
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  5. Neurobiology of stress · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Pei-Fen KuanDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, USA.
Xiaohua YangDepartment of Medicine, Stony Brook University, Stony Brook, NY, USA.
Sean CloustonDepartment of Family and Preventive Medicine, Stony Book University, Stony Brook, NY, USA.ORCID http://orcid.org/0000-0002-6124-0329
Xu RenDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, USA.
Roman KotovDepartment of Psychiatry, Stony Book University, Stony Brook, NY, USA.
Monika WaszczukDepartment of Psychiatry, Stony Book University, Stony Brook, NY, USA.
Prashant K SinghCenter for Personalized Medicine, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Sean T GlennCenter for Personalized Medicine, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Eduardo Cortes GomezDepartment of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.ORCID http://orcid.org/0000-0002-0966-6488
Jianmin WangDepartment of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Evelyn BrometDepartment of Psychiatry, Stony Book University, Stony Brook, NY, USA.
Benjamin J LuftDepartment of Medicine, Stony Brook University, Stony Brook, NY, USA. Benjamin.luft@stonybrookmedicine.edu.
Stony Brook University · USRoswell Park Comprehensive Cancer Center · USStony Brook Medicine · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI Dean G. Tang · 1985 to 2026
$116.6M
A lifecourse approach to PTSD and cognitive aging: A cohort of 9/11 respondersR01AG049953 · NIA · STATE UNIVERSITY NEW YORK STONY BROOK · PI CLOUSTON, SEAN · 2015 to 2024
$11.0M
Epigenetic Linkage Between PTSD and Respiratory Disease in WTC RespondersU01OH010416 · OH · STATE UNIVERSITY NEW YORK STONY BROOK · PI LUFT, BENJAMIN J · 2012 to 2013
$1000k
NCI NIH HHS P30 CA016056NIA NIH HHS R01 AG049953NIOSH CDC HHS U01 OH010416NIOSH CDC HHS U01 OH011478
6 · The paper itself

Abstract

Posttraumatic stress disorder (PTSD), a chronic disorder resulting from severe trauma, has been linked to immunologic dysregulation. Gene expression profiling has emerged as a promising tool for understanding the pathophysiology of PTSD. However, to date, all but one gene expression study was based on whole blood or unsorted peripheral blood mononuclear cell (PBMC), a complex tissue consisting of several populations of cells. The objective of this study was to utilize RNA sequencing to simultaneously profile the gene expression of four immune cell subpopulations (CD4T, CD8T, B cells, and monocytes) in 39 World Trade Center responders (20 with and 19 without PTSD) to determine which immune subsets play a role in the transcriptomic changes found in whole blood. Transcriptome-wide analyses identified cell-specific and shared differentially expressed genes across the four cell types. FKBP5 and PI4KAP1 genes were consistently upregulated across all cell types. Notably, REST and SEPT4, genes linked to neurodegeneration, were among the top differentially expressed genes in monocytes. Pathway analyses identified differentially expressed gene sets involved in mast cell activation and regulation in CD4T, interferon-beta production in CD8T, and neutrophil-related gene sets in monocytes. These findings suggest that gene expression indicative of immune dysregulation is common across several immune cell populations in PTSD. Furthermore, given notable differences between cell subpopulations in gene expression associated with PTSD, the results also indicate that it may be valuable to analyze different cell populations separately. Monocytes may constitute a key cell type to target in research on gene expression profile of PTSD.

Indexed as

September 11 Terrorist AttacksTranscriptomeAdultCase-Control StudiesEmergency RespondersFemaleGene Expression ProfilingHumansLeukocytes, MononuclearMaleMiddle AgedSequence Analysis, RNAStress Disorders, Post-Traumatic

Identifiers

PMID30664621
PMCPMC6341096
OpenAlexW2914052545

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.