Evidence map›Paper›PMID 30661990›Full record

ArticleCell chemical biology2019

Directed Non-targeted Mass Spectrometry and Chemical Networking for Discovery of Eicosanoids and Related Oxylipins.

Jeramie D Watrous, Teemu J Niiranen, Kim A Lagerborg, Mir Henglin, Yong-Jiang Xu, Jian Rong, Sonia Sharma, Ramachandran S Vasan, Martin G Larson, Aaron Armando and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 1 pooled it
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
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  16. GlobalNature metabolism · 2024
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Jeramie D WatrousDepartments of Medicine and Pharmacology, University of California, San Diego, CA, USA.
Teemu J NiiranenDepartment of Medicine, Turku University Hospital and University of Turku, Turku, Finland; Department of Public Health Solutions, National Institute for Health and Welfare, Turku, Finland.
Kim A LagerborgDepartments of Medicine and Pharmacology, University of California, San Diego, CA, USA.
Mir HenglinCardiovascular Division, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Yong-Jiang XuDepartments of Medicine and Pharmacology, University of California, San Diego, CA, USA.
Jian RongFramingham Heart Study, Framingham, MA, USA; Department of Biostatistics, School of Public Health, Boston University, Boston, MA, USA.
Sonia SharmaLa Jolla Institute for Immunology, La Jolla, CA, USA.
Ramachandran S VasanFramingham Heart Study, Framingham, MA, USA; Department of Epidemiology, School of Public Health, Boston University, Boston, MA, USA; Sections of Preventive Medicine and Cardiovascular Medicine, School of Medicine, Boston University, Boston, MA, USA.
Martin G LarsonFramingham Heart Study, Framingham, MA, USA; Department of Biostatistics, School of Public Health, Boston University, Boston, MA, USA.
Aaron ArmandoDepartments of Chemistry and Biochemistry and Pharmacology, University of California, San Diego, CA, USA.
Samia MoraCenter for Lipid Metabolomics, Divisions of Preventive and Cardiovascular Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Oswald QuehenbergerDepartments of Medicine and Pharmacology, University of California, San Diego, CA, USA.
Edward A DennisDepartments of Chemistry and Biochemistry and Pharmacology, University of California, San Diego, CA, USA.
Susan ChengCardiovascular Division, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Framingham Heart Study, Framingham, MA, USA; Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA. Electronic address: susan.cheng@cshs.org.
Mohit JainDepartments of Medicine and Pharmacology, University of California, San Diego, CA, USA. Electronic address: mjain@ucsd.edu.
University of California San Diego · USBoston University · USBrigham and Women's Hospital · USCedars-Sinai Medical Center · USLa Jolla Institute for Immunology · USUniversity of Turku · FI

Funding

STEROL LIPIDSU54GM069338 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 2003 to 2013
$72.2M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Andrea L Hevener · 2003 to 2026
$40.4M
SARS-CoV adaptations through a Systems Biology Lens (SYBIL)U19AI135972 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Adolfo Garcia-Sastre · 2018 to 2026
$27.2M
ACTION OF LIPOLYTIC ENZYMESR01GM020501 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 1985 to 2020
$7.3M
Bioactive Metabolites Modulate Immune-Related Adverse Events in Cancer ImmunotherapyR01CA256133 · NCI · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI DENNIS, EDWARD A, SHARMA, SONIA · 2021 to 2025
$3.5M
Mapping the Plasma Exposome and its Association with Human Cardiovascular DiseaseR01ES027595 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAIN, MOHIT · 2017 to 2021
$3.3M
Mediators of Systemic Inflammation and Heart Failure Risk in the CommunityR01HL143227 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI CHENG, SUSAN · 2019 to 2022
$3.3M
Reducing Inflammation for the Prevention of CVD: A Focus on Eicosanoid PathwaysR01HL134811 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI MORA, SAMIA · 2017 to 2020
$3.0M
Circulating plasma metabolites, diet, and risk of type 2 diabetesR01DK112940 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI HU, FRANK B, MORA, SAMIA · 2018 to 2021
$2.9M
LIPIDOMICS BASED DIAGNOSTICS FOR NONALCOHOLIC STEATOHEPATITISR01DK105961 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI DENNIS, EDWARD A, SANYAL, ARUN J · 2015 to 2018
$2.8M
Targeting tumor endothelium for cancer surveillance and immunotherapyR01CA199376 · NCI · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI SHARMA, SONIA · 2015 to 2019
$2.0M
Inflammatory Mediators, Cardiovascular Health, and Longevity in WomenR01HL134168 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI CHENG, SUSAN · 2016 to 2019
$1.6M
NCI NIH HHS R01 CA199376NCI NIH HHS R01 CA256133NHLBI NIH HHS HHSN268201500001CNHLBI NIH HHS HHSN268201500001INHLBI NIH HHS K24 HL136852NHLBI NIH HHS N01 HC025195NHLBI NIH HHS R01 HL134168NHLBI NIH HHS R01 HL134811NHLBI NIH HHS R01 HL143227NIAID NIH HHS U19 AI135972NIA NIH HHS R03 AG053287NIDDK NIH HHS K01 DK116917NIDDK NIH HHS P30 DK063491NIDDK NIH HHS R01 DK105961NIDDK NIH HHS R01 DK112940NIEHS NIH HHS R01 ES027595NIGMS NIH HHS R01 GM020501NIGMS NIH HHS U54 GM069338NIH HHS S10 OD020025
6 · The paper itself

Abstract

Eicosanoids and related oxylipins are critical, small bioactive mediators of human physiology and inflammation. While ∼1,100 distinct species have been predicted to exist, to date, less than 150 of these molecules have been measured in humans, limiting our understanding of their role in human biology. Using a directed non-targeted mass spectrometry approach in conjunction with chemical networking of spectral fragmentation patterns, we find over 500 discrete chemical signals highly consistent with known and putative eicosanoids and related oxylipins in human plasma including 46 putative molecules not previously described. In plasma samples from 1,500 individuals, we find members of this expanded oxylipin library hold close association with markers of inflammation, as well as clinical characteristics linked with inflammation, including advancing age and obesity. These experimental and computational approaches enable discovery of new chemical entities and will shed important insight into the role of bioactive molecules in human health and disease.

Indexed as

AgedChromatography, High Pressure LiquidEicosanoidsFemaleHumansInflammationMaleMiddle AgedOxylipinsTandem Mass SpectrometryEicosanoidsOxylipinsdirected non-targeted metabolomicseicosanoidsGNPSmass spectrometryoxylipinsspectral networking

Identifiers

PMID30661990
PMCPMC6636917
OpenAlexW2910713597

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.