Evidence map›Paper›PMID 30659619›Full record

ArticleJournal of fish diseases2019

Comparative transcriptome analysis reveals the role of p53 signalling pathway during red-spotted grouper nervous necrosis virus infection in Lateolabrax japonicus brain cells.

Yangxi Xiang, Peng Jia, Wei Liu, Meisheng Yi, Kuntong Jia

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of fish diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. TrematodeFrontiers in immunology · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Betanodavirus and VER Disease: A 30-year Research Review.Pathogens (Basel, Switzerland) · 2020
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yangxi XiangSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, China.
Peng JiaSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, China.
Wei LiuSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, China.
Meisheng YiSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0003-1794-2734
Kuntong JiaSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, China.
Sun Yat-sen University · CN

Funding

Fundamental Research Funds for the Central Universities 17lgpy61National Natural Science Foundation of China 31502195National Natural Science Foundation of China 31602191Natural Science Foundation of Guangdong Province 2015A030308012Pearl River S & T Nova Program of Guangzhou 201806010047Technology Planning Project of Guangdong Province 2017A030303010Zhuhai Scholar Professor Program 2015
6 · The paper itself

Abstract

Nervous necrosis virus (NNV) is one of the fish pathogens that have caused mass mortalities of many marine and freshwater fishes in the world. To better comprehend the molecular immune mechanism of sea perch (Lateolabrax japonicus) against NNV infection, the comparative transcriptome analysis of red-spotted grouper nervous necrosis virus (RGNNV)-infected or mock-infected L. japonicus brain (LJB) cells was performed via RNA sequencing technology. Here, 1,969 up-regulated genes and 9,858 down-regulated genes, which were widely implicated in immune response pathways, were identified. Furthermore, we confirmed that p53 signalling pathway was repressed at 48 hr post-RGNNV infection, as indicated by up-regulation of Mdm2 and down-regulation of p53 and its downstream target genes, including Bax, Casp8 and CytC. Overexpression of L. japonicus p53 (Ljp53) significantly inhibited RGNNV replication and up-regulated the expression of apoptosis-related genes, whereas the down-regulation caused by pifithrin-α led to the opposite effect, suggesting Ljp53 might promote cell apoptosis to repress virus replication. Luciferase assay indicated that Ljp53 could enhance the promoter activities of zebrafish interferon (IFN)1, indicating that Ljp53 could exert its anti-RGNNV activities by enforcing the type I IFN response. This study revealed the potential antiviral role of p53 during NNV infection.

Indexed as

Gene Expression ProfilingAnimalsApoptosisBrainDown-RegulationHigh-Throughput Nucleotide SequencingNodaviridaePerchesRNA Virus InfectionsSignal TransductionTumor Suppressor Protein p53Up-RegulationTumor Suppressor Protein p53apoptosisLateolabrax japonicasp53red-spotted grouper nervous necrosis virustranscriptome

Identifiers

PMID30659619
PMCPMC7166548
OpenAlexW2909439333

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.