Evidence map›Paper›PMID 30659230›Full record

ArticleScientific reports2019

Arx Expression Suppresses Ventralization of the Developing Dorsal Forebrain.

Youngshin Lim, Il-Taeg Cho, Xiuyu Shi, Judith B Grinspan, Ginam Cho, Jeffrey A Golden

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Transcription factors in microcephaly.Frontiers in neuroscience · 2023
    Review
  8. Generation of FLAG-tagged Arx knock-in mouse model.Genesis (New York, N.Y. : 2000) · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Development of a larval nervous system in the sea urchin.Current topics in developmental biology · 2022
    Review
  13. From Progenitors to Progeny: Shaping Striatal Circuit Development and Function.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Youngshin LimDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA.ORCID 0000-0002-7842-3244
Il-Taeg ChoDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA.
Xiuyu ShiDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA.
Judith B GrinspanDepartment of Neurology, Children's Hospital of Philadelphia, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.
Ginam ChoDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA. gpcho@bwh.harvard.edu.ORCID 0000-0002-7262-8716
Jeffrey A GoldenDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA. jagolden@bwh.harvard.edu.ORCID 0000-0001-9933-5502
Brigham and Women's Hospital · USChildren's Hospital of Philadelphia · US

Funding

The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI YUDKOFF, MARC · 2016 to 2020
$6.3M
Precision models of ARX-associated neurodevelopmental disordersR01NS113516 · NINDS · UNIVERSITY OF TEXAS SAN ANTONIO · PI GOLDEN, JEFFREY A, HSIEH, JENNY · 2019 to 2023
$2.6M
Arx Associated Transcriptional Networks in Neocortical DevelopmentR01NS100007 · NINDS · CEDARS-SINAI MEDICAL CENTER · PI GOLDEN, JEFFREY A · 2018 to 2021
$1.5M
Arx Associated Transcriptional Networks in Neocortical DevelopmentR56NS100007 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI GOLDEN, JEFFREY A · 2017 to 2017
$313k
NICHD NIH HHS U54 HD086984NINDS NIH HHS R01 NS100007NINDS NIH HHS R01 NS113516NINDS NIH HHS R56 NS100007
6 · The paper itself

Abstract

Early brain development requires a tight orchestration between neural tube patterning and growth. How pattern formation and brain growth are coordinated is incompletely understood. Previously we showed that aristaless-related homeobox (ARX), a paired-like transcription factor, regulates cortical progenitor pool expansion by repressing an inhibitor of cell cycle progression. Here we show that ARX participates in establishing dorsoventral identity in the mouse forebrain. In Arx mutant mice, ventral genes, including Olig2, are ectopically expressed dorsally. Furthermore, Gli1 is upregulated, suggesting an ectopic activation of SHH signaling. We show that the ectopic Olig2 expression can be repressed by blocking SHH signaling, implicating a role for SHH signaling in Olig2 induction. We further demonstrate that the ectopic Olig2 accounts for the reduced Pax6 and Tbr2 expression, both dorsal specific genes essential for cortical progenitor cell proliferation. These data suggest a link between the control of dorsoventral identity of progenitor cells and the control of their proliferation. In summary, our data demonstrate that ARX functions in a gene regulatory network integrating normal forebrain patterning and growth, providing important insight into how mutations in ARX can disrupt multiple aspects of brain development and thus generate a wide spectrum of neurodevelopmental phenotypes observed in human patients.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBody PatterningGene Regulatory NetworksHedgehog ProteinsHomeodomain ProteinsMiceOligodendrocyte Transcription Factor 2ProsencephalonTranscription FactorsZinc Finger Protein GLI1ARX protein, mouseGli1 protein, mouseHedgehog ProteinsHomeodomain ProteinsOlig2 protein, mouseOligodendrocyte Transcription Factor 2Shh protein, mouseTranscription FactorsZinc Finger Protein GLI1

Identifiers

PMID30659230
PMCPMC6338776
OpenAlexW2909288689

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.