Evidence map›Paper›PMID 30659158›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Structural basis for substrate binding and specificity of a sodium-alanine symporter AgcS.

Jinming Ma, Hsiang-Ting Lei, Francis E Reyes, Silvia Sanchez-Martinez, Maen F Sarhan, Johan Hattne, Tamir Gonen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Effect of NaCl stress on exoproteome profiles ofFrontiers in microbiology · 2023
    Article
  6. Structural basis for substrate specificity of heteromeric transporters of neutral amino acids.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jinming MaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Hsiang-Ting LeiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Francis E ReyesJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Silvia Sanchez-MartinezJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Maen F SarhanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Johan HattneJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.ORCID 0000-0002-8936-0912
Tamir GonenJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147; tgonen@ucla.edu.
Howard Hughes Medical Institute · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR029205NIGMS NIH HHS P41 GM103403
6 · The paper itself

Abstract

The amino acid, polyamine, and organocation (APC) superfamily is the second largest superfamily of membrane proteins forming secondary transporters that move a range of organic molecules across the cell membrane. Each transporter in the APC superfamily is specific for a unique subset of substrates, even if they possess a similar structural fold. The mechanism of substrate selectivity remains, by and large, elusive. Here, we report two crystal structures of an APC member from

Indexed as

Models, MolecularProtein ConformationAmino AcidsAmino Acid Transport Systems, NeutralBinding SitesMutationProtein BindingRecombinant ProteinsStructure-Activity RelationshipSubstrate SpecificitySymportersAmino AcidsAmino Acid Transport Systems, NeutralRecombinant Proteinssodium-alanine cotransporterSymporterscrystal structuremembrane proteinsecondary transporterspecificitysubstrate binding

Identifiers

PMID30659158
PMCPMC6369739
OpenAlexW2795451727

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.