Evidence map›Paper›PMID 30659095›Full record

ArticleThe Journal of biological chemistry2019

Structural insights into the tyrosine phosphorylation-mediated inhibition of SH3 domain-ligand interactions.

Balázs Merő, László Radnai, Gergő Gógl, Orsolya Tőke, Ibolya Leveles, Kitti Koprivanacz, Bálint Szeder, Metta Dülk, Gyöngyi Kudlik, Virág Vas and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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  5. Post-translational modifications in the Protein Data Bank.Acta crystallographica. Section D, Structural biology · 2024
    Review
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  8. Review
  9. Article
  10. TMEA, a Polyphenol inFrontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Balázs MerőFrom the Institute of Enzymology and.ORCID 0000-0001-9517-6460
László RadnaiFrom the Institute of Enzymology and lradnai@scripps.edu.ORCID 0000-0001-6843-3740
Gergő Góglthe Department of Biochemistry, Eötvös Loránd University, Pázmány Péter sétány 1/C, Budapest H-1117, Hungary.ORCID 0000-0002-8597-3711
Orsolya TőkeLaboratory for NMR Spectroscopy, Research Center for Natural Sciences (RCNS), Hungarian Academy of Sciences, Magyar tudósok körútja 2, Budapest H-1117, Hungary.ORCID 0000-0002-1741-1573
Ibolya LevelesFrom the Institute of Enzymology and.
Kitti KoprivanaczFrom the Institute of Enzymology and.
Bálint SzederFrom the Institute of Enzymology and.
Metta DülkFrom the Institute of Enzymology and.ORCID 0000-0001-9364-2587
Gyöngyi KudlikFrom the Institute of Enzymology and.
Virág VasFrom the Institute of Enzymology and.ORCID 0000-0001-7249-6816
Anna CserkaszkyFrom the Institute of Enzymology and.
Szabolcs Sipekithe Department of Medical Chemistry, Semmelweis University Medical School, Tűzoltó u. 37-47, Budapest H-1094, Hungary.
László Nyitraythe Department of Biochemistry, Eötvös Loránd University, Pázmány Péter sétány 1/C, Budapest H-1117, Hungary.ORCID 0000-0003-4717-5994
Beáta G VértessyFrom the Institute of Enzymology and.
László BudayFrom the Institute of Enzymology and buday.laszlo@ttk.mta.hu.
Institute of Molecular Life Sciences · HUBudapest University of Technology and Economics · HUEötvös Loránd University · HUSemmelweis University · HUHUN-REN Research Centre for Natural Sciences · HUScripps Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Src homology 3 (SH3) domains bind proline-rich linear motifs in eukaryotes. By mediating inter- and intramolecular interactions, they regulate the functions of many proteins involved in a wide variety of signal transduction pathways. Phosphorylation at different tyrosine residues in SH3 domains has been reported previously. In several cases, the functional consequences have also been investigated. However, a full understanding of the effects of tyrosine phosphorylation on the ligand interactions and cellular functions of SH3 domains requires detailed structural, atomic-resolution studies along with biochemical and biophysical analyses. Here, we present the first crystal structures of tyrosine-phosphorylated human SH3 domains derived from the Abelson-family kinases ABL1 and ABL2 at 1.6 and 1.4 Å resolutions, respectively. The structures revealed that simultaneous phosphorylation of Tyr

Indexed as

src Homology DomainsAmino Acid SequenceCrystallography, X-RayDimerizationHumansLigandsNuclear Magnetic Resonance, BiomolecularPhosphorylationProtein BindingProtein ConformationProtein-Tyrosine KinasesProto-Oncogene Proteins c-ablScattering, Small AngleTyrosineABL1 protein, humanARG tyrosine kinaseLigandsProtein-Tyrosine KinasesProto-Oncogene Proteins c-ablTyrosine3BP-2ABI2ABL tyrosine kinaseligand bindingnuclear magnetic resonance (NMR)phosphotyrosine signalingpost translational modification (PTM)protein phosphorylationsmall-angle X-ray scattering (SAXS)Src homology 3 domain (SH3 domain)X-ray crystallography

Identifiers

PMID30659095
PMCPMC6433060
OpenAlexW2909267224

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.