Evidence map›Paper›PMID 30658967›Full record

ArticleG3 (Bethesda, Md.)2019

Dynamic Interactions Between the Genome and an Endogenous Retrovirus:

Marie Fablet, Angelo Jacquet, Rita Rebollo, Annabelle Haudry, Carine Rey, Judit Salces-Ortiz, Prajakta Bajad, Nelly Burlet, Michael F Jantsch, Maria Pilar García Guerreiro and 1 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Viral infection impacts transposable element transcript amounts inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Marie FabletLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France marie.fablet@univ-lyon1.fr.ORCID 0000-0002-7819-4541
Angelo JacquetLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France.
Rita RebolloBF2i, Univ Lyon, INSA-Lyon, INRA, UMR 0203, Villeurbanne 69621, France.
Annabelle HaudryLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France.
Carine ReyLaboratoire de Biologie et Modélisation de la Cellule, UnivLyon, ENS de Lyon, Univ Claude Bernard, CNRS UMR 5239, INSERM U1210, Lyon 69007, France.
Judit Salces-OrtizLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France.
Prajakta BajadCenter for Anatomy and Cell Biology, Division of Cell- and Developmental Biology, Medical University of Vienna, Vienna 1090, Austria.
Nelly BurletLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France.
Michael F JantschCenter for Anatomy and Cell Biology, Division of Cell- and Developmental Biology, Medical University of Vienna, Vienna 1090, Austria.
Maria Pilar García GuerreiroGrup de Genòmica, Bioinformàtica i Biologia Evolutiva, Departament de Genètica i Microbiologia, Universitat Autònoma de Barcelona, Bellaterra-Barcelona 08193, Spain.
Cristina VieiraLaboratoire de Biométrie et Biologie Evolutive, Université de Lyon; Université Lyon 1; CNRS; UMR 5558, Villeurbanne 69622, France.
Université Claude Bernard Lyon 1 · FRMedical University of Vienna · ATUniversitat Autònoma de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

All genomes contain repeated sequences that are known as transposable elements (TEs). Among these are endogenous retroviruses (ERVs), which are sequences similar to retroviruses and are transmitted across generations from parent to progeny. These sequences are controlled in genomes through epigenetic mechanisms. At the center of the epigenetic control of TEs are small interfering RNAs of the piRNA class, which trigger heterochromatinization of TE sequences. The

Indexed as

DNA Transposable ElementsEpigenesis, GeneticGenome, InsectHost-Pathogen InteractionsAnimalsDrosophila simulansEndogenous RetrovirusesFemaleRNA, Small InterferingDNA Transposable ElementsRNA, Small InterferingchromatinDrosophilaepigenetic controlpiRNARetrotransposonTransposable element

Identifiers

PMID30658967
PMCPMC6404621
OpenAlexW2909984510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.